Detailed information
Bioinformatically predicted
Overview
| Name | ctsF | Type | Machinery gene |
| Locus tag | R9A00_RS07300 | Genome accession | NZ_AP028376 |
| Coordinates | 1418594..1419775 (-) | Length | 393 a.a. |
| NCBI ID | WP_032586873.1 | Uniprot ID | - |
| Organism | Campylobacter jejuni strain BCH-10927 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1413594..1424775
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R9A00_RS07270 (B10927_14390) | - | 1414144..1414485 (+) | 342 | WP_002784057.1 | hypothetical protein | - |
| R9A00_RS07275 (B10927_14400) | flgM | 1414542..1414739 (+) | 198 | WP_002779262.1 | flagellar biosynthesis anti-sigma factor FlgM | - |
| R9A00_RS07280 (B10927_14410) | - | 1414782..1415216 (+) | 435 | WP_032586868.1 | flagellar protein FlgN | - |
| R9A00_RS07285 (B10927_14420) | flgK | 1415226..1417052 (+) | 1827 | WP_100626665.1 | flagellar hook-associated protein FlgK | - |
| R9A00_RS07290 (B10927_14430) | - | 1417069..1417833 (+) | 765 | WP_052800369.1 | TIGR02757 family protein | - |
| R9A00_RS07295 (B10927_14440) | - | 1417837..1418601 (+) | 765 | WP_061099855.1 | TSUP family transporter | - |
| R9A00_RS07300 (B10927_14450) | ctsF | 1418594..1419775 (-) | 1182 | WP_032586873.1 | type II secretion system F family protein | Machinery gene |
| R9A00_RS07305 (B10927_14460) | ctsE | 1419772..1421331 (-) | 1560 | WP_032586875.1 | GspE/PulE family protein | Machinery gene |
| R9A00_RS07310 (B10927_14470) | ctsX | 1421321..1421908 (-) | 588 | WP_032584555.1 | transformation system protein | Machinery gene |
| R9A00_RS07315 (B10927_14480) | ctsP | 1421912..1422520 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R9A00_RS07320 (B10927_14490) | ctsD | 1422513..1423925 (-) | 1413 | WP_002862130.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R9A00_RS07325 (B10927_14500) | ctsR | 1423903..1424214 (-) | 312 | WP_317729359.1 | transformation system protein | Machinery gene |
Sequence
Protein
Download Length: 393 a.a. Molecular weight: 45744.36 Da Isoelectric Point: 9.0938
>NTDB_id=105057 R9A00_RS07300 WP_032586873.1 1418594..1419775(-) (ctsF) [Campylobacter jejuni strain BCH-10927]
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN
MKFYEVEFLKNNQNYTKTIKAENLNTAQAKALSKNWKIIDIKEIQKSNFQRLKDENFILFFKELALLCEVGLSVQEAIRE
LYLMHSCKIMKKILDNLILAQNLNQAFENANFGLNRAELALIKTAEKTGKISEVFSQISKLREKSLESQKQLKKAFRYPT
LVFLSIIGAFLFLMLFVVPNFKDLFENLGASLPFITHVMLEIYNFLDDYGIFCIFLFVIFIVMLILAYKNFHSFAFSCDF
LFLKIPLISRLIIYNQNYYFFMVFSLLLKNGISISKAFDLAIIGLENKFLIFQYKKLFSFIDSGLELSQAFKKIDIFDSL
VFSMLSVAMKSGRLEVLSEEIAKYYQQKSENLMDRFLIFLEPMMTLFVALLVLFLALGIFLPMWELSSGVNFN
Nucleotide
Download Length: 1182 bp
>NTDB_id=105057 R9A00_RS07300 WP_032586873.1 1418594..1419775(-) (ctsF) [Campylobacter jejuni strain BCH-10927]
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTGTCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCACTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCCAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTTAGCGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAACTTAGCTCAGGGGTTAATTTTAACTAA
ATGAAATTTTATGAAGTAGAATTTCTTAAAAACAATCAAAATTATACAAAAACTATAAAAGCTGAAAATTTAAATACAGC
ACAAGCAAAAGCCTTGTCAAAGAATTGGAAAATCATTGATATAAAAGAAATTCAAAAATCTAATTTTCAGAGATTAAAGG
ATGAAAATTTTATACTCTTTTTTAAAGAGCTAGCTTTGTTGTGTGAAGTTGGATTAAGTGTTCAAGAAGCGATTAGAGAA
TTATATCTTATGCACTCTTGCAAGATTATGAAAAAAATATTAGACAATTTAATTTTAGCCCAAAATCTAAATCAAGCTTT
TGAAAATGCTAATTTTGGATTAAATCGTGCGGAGTTAGCTTTGATTAAAACGGCTGAAAAGACAGGAAAAATCAGTGAAG
TGTTTAGTCAAATTTCTAAACTTCGAGAAAAAAGCTTAGAGAGTCAAAAACAATTAAAAAAGGCTTTTAGATATCCTACT
TTGGTTTTTTTAAGTATTATCGGAGCATTTTTGTTTTTAATGCTTTTTGTAGTGCCTAATTTTAAAGATTTATTTGAAAA
TTTAGGCGCGAGTTTGCCTTTTATCACGCATGTAATGTTAGAAATTTATAATTTTTTAGATGACTATGGAATTTTTTGCA
TATTTTTGTTTGTTATTTTTATTGTTATGCTTATTTTAGCTTATAAAAATTTTCATTCTTTTGCTTTTTCTTGCGATTTT
TTATTTTTAAAAATACCTTTGATTTCTCGTTTGATTATTTATAATCAAAATTATTATTTTTTTATGGTTTTTTCTTTGCT
TTTAAAAAATGGAATTTCAATATCCAAAGCTTTTGATTTAGCTATTATAGGGCTTGAAAATAAATTTTTAATTTTTCAGT
ATAAAAAACTTTTTAGTTTTATAGATTCTGGTCTTGAGTTAAGTCAGGCTTTTAAAAAGATTGATATTTTTGATTCTTTG
GTATTTTCTATGCTTAGCGTTGCGATGAAAAGTGGAAGACTTGAAGTGTTAAGTGAAGAAATTGCCAAATATTATCAACA
AAAAAGTGAAAATTTAATGGATAGATTTTTGATTTTTTTAGAGCCTATGATGACTTTATTTGTGGCGCTTTTAGTTTTGT
TTTTGGCTTTAGGTATATTTTTACCTATGTGGGAACTTAGCTCAGGGGTTAATTTTAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsF | Campylobacter jejuni subsp. jejuni 81-176 |
98.724 |
99.746 |
0.985 |