Detailed information NTG1049883

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACEUIV_RS17820
• Genome accession: NZ_CP169221
• Coordinates: 3895270..3896640 (+)
• Length: 456 a.a.
• NCBI ID: WP_022996661.1
• Uniprot ID: -
• Organism: Alloalcanivorax xenomutans strain A28
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3890270..3901640

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEUIV_RS17800	-	3890545..3891360 (+)	816	WP_022996657.1	outer membrane protein assembly factor BamD	-
ACEUIV_RS17805	-	3891413..3893038 (-)	1626	WP_026949554.1	NAD+ synthase	-
ACEUIV_RS17810	-	3893404..3893664 (+)	261	WP_026949553.1	PP0621 family protein	-
ACEUIV_RS17815	-	3893684..3895267 (+)	1584	WP_022996660.1	ATP-binding protein	-
ACEUIV_RS17820	pilR	3895270..3896640 (+)	1371	WP_022996661.1	sigma-54 dependent transcriptional regulator	Regulator
ACEUIV_RS17825	-	3896613..3897698 (-)	1086	WP_022996662.1	FAD-binding oxidoreductase	-
ACEUIV_RS17830	-	3897827..3898315 (+)	489	WP_022996663.1	GspH/FimT family protein	-
ACEUIV_RS17835	-	3898345..3898764 (-)	420	WP_026949552.1	type IV pilin protein	-

Sequence

Protein

• Length: 456 a.a.
• Molecular weight: 50345.47 Da
• Isoelectric Point: 5.6549

>NTDB_id=1049883 ACEUIV_RS17820 WP_022996661.1 3895270..3896640(+) (pilR) [Alloalcanivorax xenomutans strain A28]
MNDIIPRVLVVDDEADLRELLVITLGRMKLEATAADSLAAAQRLLDRDTFHLCLTDMNLGDGSGLQLIRYAAEKAPDMPI
AVLTAFGNMETATEAMKLGAYDFIAKPVSLDRLRQLIQDGLGISRHGAANGGEDDGLIGQSPAMQHLRRQIRKLARSQAP
IYISGESGSGKEKVARLIHTLGPRGDHPFVAVNCGAIPSELMESEFFGHRKGSFTGAVEDRKGLFREADGGTLFLDEVAD
LPLHMQVKLLRAIQEKTVRPVGESREFSVNLRILCATHKDLSEEMQAGRFRQDLYYRLNVIEAHVPPLRERLEDVPALVE
HILSRLGIAWDTTPPTLSNGTLAALRDYPFPGNVRELENVLERAMTLCDGNVIEPAHLRLPSQASGEAPSQGGSRDPALP
LEDYLQDIERQEILKALDATHWNRTAAAKKLGMTFRSLRYRLKKLALDQEEEEGSA

Nucleotide

• Length: 1371 bp

>NTDB_id=1049883 ACEUIV_RS17820 WP_022996661.1 3895270..3896640(+) (pilR) [Alloalcanivorax xenomutans strain A28]
ATGAATGACATAATTCCGCGTGTTTTGGTTGTGGACGACGAAGCGGACCTGAGAGAACTTCTGGTCATCACCCTCGGGCG
GATGAAATTGGAAGCAACGGCCGCGGACTCCCTGGCCGCCGCCCAGCGGCTGCTGGATCGCGACACCTTTCATCTTTGCC
TGACCGATATGAACCTGGGCGATGGCTCCGGTTTACAGCTGATCCGCTACGCGGCGGAGAAGGCGCCAGACATGCCCATC
GCGGTACTCACCGCATTCGGCAACATGGAGACCGCCACCGAAGCGATGAAACTGGGGGCCTACGATTTCATCGCCAAACC
CGTCTCGCTGGACCGGCTGCGGCAGTTGATTCAGGACGGCCTCGGCATCAGCCGCCATGGCGCCGCCAACGGCGGCGAGG
ACGATGGTCTGATTGGCCAGTCGCCGGCCATGCAGCATTTGCGACGGCAAATCCGCAAACTGGCACGCAGCCAGGCGCCA
ATCTACATCAGCGGCGAATCCGGCAGCGGCAAGGAAAAAGTGGCGCGTCTGATTCACACGCTGGGGCCGCGCGGTGACCA
CCCTTTCGTTGCGGTGAACTGCGGCGCCATCCCTTCCGAACTGATGGAAAGTGAATTTTTCGGTCACCGCAAAGGCAGTT
TCACCGGCGCCGTGGAAGACCGCAAAGGCCTGTTCCGGGAAGCGGACGGAGGCACCCTGTTTCTTGATGAGGTAGCGGAT
CTGCCTCTGCACATGCAGGTCAAGCTGCTGCGTGCGATTCAGGAGAAAACCGTGCGGCCGGTGGGCGAGTCACGGGAGTT
CAGCGTCAACCTGCGTATTCTTTGCGCCACCCACAAGGATCTCAGCGAGGAAATGCAGGCGGGCCGCTTTCGTCAGGACC
TCTACTACCGGCTGAATGTCATCGAGGCACACGTGCCGCCGCTGCGCGAGCGCCTGGAGGACGTTCCGGCGCTGGTTGAG
CATATCCTCTCCCGGCTCGGCATCGCCTGGGATACCACGCCGCCCACGCTCAGTAACGGTACTCTGGCGGCGCTGCGCGA
CTATCCGTTTCCCGGCAACGTGCGAGAGCTGGAAAACGTACTGGAGCGGGCCATGACCCTGTGTGATGGCAACGTTATCG
AACCGGCGCATCTGCGGCTACCCAGCCAGGCCAGCGGCGAAGCACCCAGCCAGGGCGGCAGCCGGGATCCGGCTTTGCCA
TTGGAGGATTATCTACAGGACATCGAGCGGCAGGAAATTCTCAAAGCGCTGGATGCCACCCACTGGAATCGCACCGCCGC
CGCCAAGAAGCTGGGTATGACGTTTCGCTCATTGCGTTACCGCTTGAAGAAACTGGCCCTGGATCAGGAAGAAGAGGAAG
GCAGCGCGTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (137-302)

• Bacterial regulatory protein, Fis family (HTH_8) (405-445)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	61.712	97.368	0.601
pilR	Acinetobacter baumannii strain A118	49.356	100	0.504
luxO	Vibrio cholerae strain A1552	41.523	89.254	0.371