Detailed information NTG1049836

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACEPA4_RS15730
• Genome accession: NZ_CP169216
• Coordinates: 3400402..3401775 (+)
• Length: 457 a.a.
• NCBI ID: WP_065178929.1
• Uniprot ID: -
• Organism: Stenotrophomonas sp. P2112
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 3395402..3406775

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACEPA4_RS15715 (ACEPA4_15715)	sucD	3396251..3397126 (-)	876	WP_005418610.1	succinate--CoA ligase subunit alpha	-
ACEPA4_RS15720 (ACEPA4_15720)	sucC	3397151..3398320 (-)	1170	WP_005418614.1	ADP-forming succinate--CoA ligase subunit beta	-
ACEPA4_RS15725 (ACEPA4_15725)	-	3398728..3400341 (+)	1614	WP_061480577.1	PAS domain-containing sensor histidine kinase	-
ACEPA4_RS15730 (ACEPA4_15730)	pilR	3400402..3401775 (+)	1374	WP_065178929.1	sigma-54 dependent transcriptional regulator	Regulator
ACEPA4_RS15735 (ACEPA4_15735)	pilB	3401910..3403640 (-)	1731	WP_164229951.1	type IV-A pilus assembly ATPase PilB	Machinery gene
ACEPA4_RS15740 (ACEPA4_15740)	-	3404003..3404875 (+)	873	WP_164229953.1	glycosyltransferase family 2 protein	-
ACEPA4_RS15745 (ACEPA4_15745)	-	3404887..3406101 (+)	1215	WP_219634362.1	glycosyltransferase family 4 protein	-

Sequence

Protein

• Length: 457 a.a.
• Molecular weight: 49681.93 Da
• Isoelectric Point: 6.4421

>NTDB_id=1049836 ACEPA4_RS15730 WP_065178929.1 3400402..3401775(+) (pilR) [Stenotrophomonas sp. P2112]
MNETRSALVVDDERDIRELLVLTLGRMGLRISTAANLAEARELLASNPYDLCITDMRLPDGNGIELVSEIAQHYPRTPVA
MITAFGSMDLAVEALKAGAFDFVSKPVDIAVLRGLVKHALELNNTERPVPGPAAEQGARLLGDSPAMDVLRTTIGKVARS
QAPVYILGESGVGKELVARTIHAQGARAAGPFVPVNCGAIPGELMESEFFGHRKGSFSGAHADKPGLFQAAHGGTLFLDE
VAELPLQMQVKLLRAIQEKSVRAVGAANEEPVDVRILSATHKDLAELVEDGRFRHDLYYRINVIELRVPPLRERRQDLPE
LAASVLARLARSHGRPTPLLAPSALDALAQYAFPGNVRELENILERALALAEEDRIGADDLRLPQHAPRTPGSAAHAEAV
ADLQPGNAALPSYIEQLERSAIQRALEENRWNKTRTAAQLGITFRALRYKLKKLGME

Nucleotide

• Length: 1374 bp

>NTDB_id=1049836 ACEPA4_RS15730 WP_065178929.1 3400402..3401775(+) (pilR) [Stenotrophomonas sp. P2112]
ATGAACGAAACCCGCAGCGCCCTCGTCGTCGACGACGAACGCGACATCCGCGAACTGCTGGTACTGACGCTCGGCCGCAT
GGGGCTGCGCATCAGTACCGCAGCCAACCTTGCCGAAGCGCGCGAACTGCTGGCCAGCAATCCGTACGACCTGTGCATCA
CCGACATGCGCCTGCCGGACGGCAACGGCATCGAGCTGGTCAGCGAGATCGCCCAGCACTACCCGCGCACGCCGGTGGCG
ATGATCACTGCCTTTGGCAGCATGGACTTGGCGGTGGAAGCGCTGAAGGCCGGCGCCTTCGATTTCGTCAGCAAGCCGGT
GGACATCGCCGTGCTGCGTGGCCTGGTCAAGCACGCGCTGGAACTCAACAACACCGAGCGCCCCGTGCCCGGCCCCGCCG
CCGAACAAGGGGCGCGCCTGCTCGGCGATTCGCCGGCCATGGACGTGCTGCGTACCACCATCGGCAAGGTCGCGCGCAGC
CAGGCGCCGGTCTACATCCTCGGTGAATCCGGCGTGGGCAAGGAGCTGGTCGCGCGCACCATCCATGCCCAGGGTGCCCG
CGCGGCCGGCCCGTTCGTGCCGGTCAACTGCGGCGCCATTCCCGGCGAGCTGATGGAGAGCGAATTCTTCGGCCACCGCA
AGGGCAGCTTCAGCGGCGCCCACGCCGACAAGCCCGGGCTGTTCCAGGCCGCGCATGGCGGCACCCTGTTCCTGGACGAA
GTGGCCGAGCTGCCCCTGCAGATGCAGGTGAAGCTGCTGCGCGCGATCCAGGAAAAATCGGTGCGCGCGGTCGGTGCGGC
CAACGAAGAGCCGGTGGACGTGCGCATCCTCTCGGCCACCCACAAGGACCTGGCCGAACTGGTCGAGGACGGCCGTTTCC
GCCACGACCTCTACTACCGCATCAACGTGATCGAACTGAGGGTGCCGCCGCTGCGCGAGCGTCGCCAGGACCTGCCGGAA
CTGGCCGCGTCGGTGCTGGCACGGCTGGCCCGCAGCCATGGCCGCCCGACGCCGTTGCTGGCGCCGTCGGCACTGGACGC
ACTGGCCCAGTACGCCTTCCCCGGCAACGTGCGCGAACTGGAAAACATCCTGGAACGCGCGCTGGCACTGGCCGAAGAAG
ACCGTATCGGCGCCGACGACCTGCGCCTGCCGCAGCATGCCCCGCGCACGCCCGGCAGCGCAGCACATGCCGAAGCCGTG
GCTGACCTGCAGCCCGGCAACGCCGCCCTGCCCTCGTACATCGAACAGCTCGAGCGCAGCGCCATACAGCGCGCGCTGGA
AGAAAACCGCTGGAACAAGACCCGCACCGCCGCGCAGCTGGGCATCACCTTCCGCGCGCTGCGCTACAAGCTGAAGAAGC
TGGGGATGGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (414-454)

• Sigma-54 interaction domain (Sigma54_activat) (141-306)

• Response regulator receiver domain (Response_reg) (8-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	63.377	99.781	0.632
pilR	Acinetobacter baumannii strain A118	48.38	100	0.49