Detailed information
Bioinformatically predicted
Overview
| Name | ctsX | Type | Machinery gene |
| Locus tag | R8950_RS07490 | Genome accession | NZ_AP028355 |
| Coordinates | 1465708..1466295 (-) | Length | 195 a.a. |
| NCBI ID | WP_002851370.1 | Uniprot ID | A0AB36G4D4 |
| Organism | Campylobacter jejuni strain BCH-10539 | ||
| Function | DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1460708..1471295
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8950_RS07470 (B10539_14790) | - | 1461456..1462220 (+) | 765 | WP_002851318.1 | TIGR02757 family protein | - |
| R8950_RS07475 (B10539_14800) | - | 1462224..1462988 (+) | 765 | WP_002855821.1 | TSUP family transporter | - |
| R8950_RS07480 (B10539_14810) | ctsF | 1462981..1464162 (-) | 1182 | WP_060809666.1 | type II secretion system F family protein | Machinery gene |
| R8950_RS07485 (B10539_14820) | ctsE | 1464159..1465718 (-) | 1560 | WP_317725312.1 | GspE/PulE family protein | Machinery gene |
| R8950_RS07490 (B10539_14830) | ctsX | 1465708..1466295 (-) | 588 | WP_002851370.1 | membrane protein | Machinery gene |
| R8950_RS07495 (B10539_14840) | ctsP | 1466299..1466907 (-) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| R8950_RS07500 (B10539_14850) | ctsD | 1466900..1468312 (-) | 1413 | WP_002855316.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| R8950_RS07505 (B10539_14860) | ctsR | 1468290..1468601 (-) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
Sequence
Protein
Download Length: 195 a.a. Molecular weight: 23359.43 Da Isoelectric Point: 9.8409
>NTDB_id=104683 R8950_RS07490 WP_002851370.1 1465708..1466295(-) (ctsX) [Campylobacter jejuni strain BCH-10539]
MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
MQERIKELELRYKYFLLKKYLKYLLLIILISVIAFCFFVLMQKYNKQKNIYLQAIEHKKHLEQKILQAQILQEKNKISRE
KLYKELEEVKAVQENTHISKIEIDSKILNISDLKKSFYQNPSYEKALNLAKKYFDIKAYQKTIFWALKANELDKQKQDSW
LIFAQAKRALGEEKEAQSALDAYINYYGLMELDGK
Nucleotide
Download Length: 588 bp
>NTDB_id=104683 R8950_RS07490 WP_002851370.1 1465708..1466295(-) (ctsX) [Campylobacter jejuni strain BCH-10539]
ATGCAAGAAAGAATTAAAGAGCTTGAGCTTAGGTATAAATACTTTTTACTTAAAAAATATTTAAAATATTTATTATTAAT
TATTCTAATATCAGTAATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAGG
CTATTGAACATAAAAAGCATTTGGAGCAAAAGATTCTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGCAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCATTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGCGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
ATGCAAGAAAGAATTAAAGAGCTTGAGCTTAGGTATAAATACTTTTTACTTAAAAAATATTTAAAATATTTATTATTAAT
TATTCTAATATCAGTAATAGCATTTTGTTTTTTTGTGCTAATGCAAAAATATAATAAGCAAAAAAATATTTATTTGCAGG
CTATTGAACATAAAAAGCATTTGGAGCAAAAGATTCTTCAAGCGCAAATTTTACAAGAAAAAAATAAGATTTCTAGGGAA
AAGTTATATAAAGAACTAGAAGAAGTTAAAGCGGTGCAGGAAAATACACATATTAGCAAGATAGAAATTGATTCTAAAAT
TTTAAATATTTCTGATTTAAAAAAATCTTTTTATCAAAATCCAAGCTATGAAAAGGCATTAAATTTAGCTAAGAAGTATT
TTGATATTAAAGCTTATCAAAAGACAATATTTTGGGCTTTAAAAGCCAATGAACTTGACAAGCAAAAACAAGATTCTTGG
CTGATTTTTGCTCAGGCTAAAAGAGCTTTAGGCGAAGAAAAAGAAGCTCAAAGTGCTTTAGATGCTTATATAAATTATTA
TGGTTTAATGGAATTAGATGGAAAGTAG
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsX | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |