Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | R8497_RS05335 | Genome accession | NZ_AP028352 |
| Coordinates | 1028279..1028581 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain BCH-10518 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1023279..1033581
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R8497_RS05310 (B10518_10370) | rpsR | 1023641..1023901 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| R8497_RS05315 (B10518_10380) | lon | 1023962..1026337 (-) | 2376 | WP_002852988.1 | endopeptidase La | - |
| R8497_RS05320 (B10518_10390) | - | 1026354..1027001 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| R8497_RS05325 (B10518_10400) | fliW | 1027162..1027551 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| R8497_RS05330 (B10518_10410) | proC | 1027551..1028282 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| R8497_RS05335 (B10518_10420) | ctsT | 1028279..1028581 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| R8497_RS05340 (B10518_10430) | - | 1028578..1029240 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| R8497_RS05345 (B10518_10440) | - | 1029237..1029689 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| R8497_RS05350 (B10518_10450) | hemD | 1029686..1030315 (-) | 630 | WP_002859147.1 | uroporphyrinogen-III synthase | - |
| R8497_RS05355 (B10518_10460) | thiE | 1030293..1030925 (-) | 633 | WP_002867188.1 | thiamine phosphate synthase | - |
| R8497_RS05360 (B10518_10470) | thiD | 1030915..1031727 (-) | 813 | WP_002869542.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| R8497_RS05365 (B10518_10480) | - | 1031724..1032410 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| R8497_RS05370 (B10518_10490) | - | 1032407..1033168 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=104646 R8497_RS05335 WP_002853046.1 1028279..1028581(+) (ctsT) [Campylobacter jejuni strain BCH-10518]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=104646 R8497_RS05335 WP_002853046.1 1028279..1028581(+) (ctsT) [Campylobacter jejuni strain BCH-10518]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |