Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   ACEPSM_RS08185 Genome accession   NZ_CP168700
Coordinates   1754602..1755879 (+) Length   425 a.a.
NCBI ID   WP_395323103.1    Uniprot ID   -
Organism   Levilactobacillus parabrevis strain FUA 30078     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1749602..1760879
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEPSM_RS08155 tsf 1750019..1750903 (+) 885 WP_020088595.1 translation elongation factor Ts -
  ACEPSM_RS08160 pyrH 1751049..1751771 (+) 723 WP_020088594.1 UMP kinase -
  ACEPSM_RS08165 frr 1751774..1752331 (+) 558 WP_395323101.1 ribosome recycling factor -
  ACEPSM_RS08170 - 1752358..1752780 (+) 423 WP_020088592.1 hypothetical protein -
  ACEPSM_RS08175 - 1752895..1753692 (+) 798 WP_395323102.1 isoprenyl transferase -
  ACEPSM_RS08180 - 1753714..1754502 (+) 789 WP_020088590.1 phosphatidate cytidylyltransferase -
  ACEPSM_RS08185 eeP 1754602..1755879 (+) 1278 WP_395323103.1 RIP metalloprotease RseP Regulator
  ACEPSM_RS08190 - 1755916..1757628 (+) 1713 WP_395323104.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46198.60 Da        Isoelectric Point: 9.3457

>NTDB_id=1045083 ACEPSM_RS08185 WP_395323103.1 1754602..1755879(+) (eeP) [Levilactobacillus parabrevis strain FUA 30078]
MITTIITFIIVFGILVIVHEFGHFYFAKRGGILVREFSIGMGPKLFYRRGKDGTTYTVRLLPVGGYVRMAGAEDDEDEIK
PGTPVSLYLGKDDQVERINASKKSTLFNGIPVEITGSDLEDELWIEGYENGDESEVKRYPVAHNATIIETDGTELQIAPK
DVQFQAASLGRRLMTNFAGPMNNIILAIVTFMLMSFVQGGVAMGTNQIQVASSPVSIAKKAGIQNNDKILSVNGKQTKDW
TSLSTAIQPRANKATKVVIQRGSTQKTLTLTPKGEQSNGKTVGMIGITQAQNKHIGAILASGFTQTWTMTKALFGALWSM
VSGHFSLNDLGGPVAIFATTSQATKFGLVGVLNFLAFLSINLAIVNLIPIPALDGGKILLNFIEAIRRKPLSENVEAGIT
LVGVGFLVILMLLVTWNDIERYFIH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1045083 ACEPSM_RS08185 WP_395323103.1 1754602..1755879(+) (eeP) [Levilactobacillus parabrevis strain FUA 30078]
GTGATTACAACGATTATTACCTTTATTATCGTCTTTGGGATTCTGGTCATCGTTCACGAATTTGGGCATTTTTACTTTGC
CAAACGTGGTGGGATCTTGGTCCGAGAATTTTCTATTGGGATGGGTCCCAAGTTGTTTTACCGGCGCGGGAAGGATGGGA
CGACCTATACTGTCCGTCTATTACCCGTCGGGGGGTACGTCCGCATGGCGGGTGCCGAGGACGACGAAGATGAAATTAAG
CCCGGGACACCGGTCAGCCTGTACTTAGGCAAGGATGATCAGGTCGAACGGATCAATGCTAGCAAAAAGTCGACGTTGTT
TAACGGGATTCCAGTCGAAATCACCGGCTCTGATCTGGAGGATGAGCTCTGGATCGAGGGTTATGAAAATGGTGATGAGT
CTGAGGTCAAGCGTTACCCGGTCGCGCACAATGCGACCATTATTGAGACCGATGGTACCGAGCTGCAGATTGCGCCTAAG
GATGTGCAATTCCAAGCAGCTTCGTTAGGTCGGCGCCTCATGACCAACTTCGCCGGGCCGATGAACAACATCATCTTGGC
TATCGTGACGTTCATGCTGATGTCGTTTGTGCAAGGCGGGGTCGCCATGGGGACCAACCAAATCCAAGTGGCAAGTTCAC
CGGTGTCCATCGCCAAGAAGGCTGGTATCCAGAACAATGACAAGATCCTGTCCGTGAATGGCAAGCAGACCAAGGACTGG
ACATCATTGAGTACGGCCATTCAACCGCGGGCCAACAAGGCCACCAAGGTTGTCATTCAACGCGGTAGCACGCAGAAAAC
GCTGACGTTGACACCAAAGGGCGAGCAGTCCAACGGTAAAACGGTTGGGATGATTGGGATTACCCAGGCACAGAACAAGC
ATATCGGGGCCATTTTGGCTTCCGGGTTCACACAGACCTGGACGATGACCAAGGCGCTCTTTGGGGCGCTCTGGAGTATG
GTCTCCGGTCACTTTAGTCTGAACGATTTGGGTGGGCCAGTTGCGATCTTTGCAACGACCTCTCAAGCCACTAAATTTGG
CCTGGTCGGCGTGTTGAACTTCCTGGCTTTCTTGTCGATCAACTTGGCAATTGTCAATTTAATACCAATTCCTGCCTTAG
ATGGTGGTAAAATATTATTGAACTTTATTGAAGCTATCCGGCGCAAGCCCCTTTCCGAAAACGTGGAAGCGGGGATCACG
CTGGTCGGTGTCGGCTTCCTGGTGATTCTGATGTTACTGGTGACCTGGAACGATATCGAACGCTACTTTATTCACTAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-410)

PDZ domain (PDZ_6)

(214-261)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

49.882

100

0.499
  eeP Streptococcus thermophilus LMG 18311

49.882

100

0.499

Multiple sequence alignment