Detailed information NTG0104392

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: Q433_RS13805
• Genome accession: NZ_CP007409
• Coordinates: 2649008..2649613 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2644008..2654613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
Q433_RS13775 (Q433_14930)	-	2644821..2645210 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
Q433_RS13780 (Q433_14935)	yajC	2645267..2645533 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
Q433_RS13785 (Q433_14940)	tgt	2645570..2646715 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
Q433_RS13790 (Q433_14945)	queA	2646742..2647770 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
Q433_RS13795 (Q433_14950)	yrzS	2647800..2648000 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
Q433_RS13800 (Q433_14955)	ruvB	2647993..2648997 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
Q433_RS13805 (Q433_14960)	ruvA	2649008..2649613 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
Q433_RS13810 (Q433_14965)	bofC	2649752..2650264 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
Q433_RS13815 (Q433_14970)	csbX	2650312..2651619 (-)	1308	WP_003246197.1	MFS transporter	-
Q433_RS13820 (Q433_14975)	iolG	2651690..2652715 (-)	1026	WP_029318179.1	inositol 2-dehydrogenase	-
Q433_RS13825 (Q433_14980)	yrzF	2652953..2653600 (+)	648	WP_003246159.1	phosphotransferase	-
Q433_RS21640	-	2653646..2653768 (-)	123	WP_003229707.1	hypothetical protein	-
Q433_RS22005	-	2653853..2653927 (+)	75	Protein_2683	hypothetical protein	-
Q433_RS21645 (Q433_14990)	-	2653931..2654299 (+)	369	WP_224912982.1	DUF5412 family protein	-
Q433_RS13840 (Q433_14995)	-	2654306..2654446 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=104392 Q433_RS13805 WP_003229717.1 2649008..2649613(-) (ruvA) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=104392 Q433_RS13805 WP_003229717.1 2649008..2649613(-) (ruvA) [Bacillus subtilis subsp. subtilis str. OH 131.1 strain OH131.1]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTGTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCAGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408