Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   ACD269_RS10960 Genome accession   NZ_CP168260
Coordinates   2127750..2128508 (+) Length   252 a.a.
NCBI ID   WP_000410384.1    Uniprot ID   C1CBL7
Organism   Streptococcus pneumoniae strain FC2     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2122750..2133508
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD269_RS10930 (ACD269_10930) comE 2123346..2124098 (-) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator
  ACD269_RS10935 (ACD269_10935) comD/comD1 2124095..2125420 (-) 1326 WP_015898772.1 competence system sensor histidine kinase ComD Regulator
  ACD269_RS10940 (ACD269_10940) comC/comC1 2125441..2125566 (-) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  ACD269_RS10950 (ACD269_10950) rlmH 2125849..2126328 (-) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  ACD269_RS10955 (ACD269_10955) htrA 2126511..2127692 (+) 1182 WP_373380559.1 S1C family serine protease Regulator
  ACD269_RS10960 (ACD269_10960) spo0J 2127750..2128508 (+) 759 WP_000410384.1 ParB/RepB/Spo0J family partition protein Regulator
  ACD269_RS10965 (ACD269_10965) - 2128721..2129683 (+) 963 WP_011117663.1 protein rep -
  ACD269_RS10970 (ACD269_10970) - 2130604..2131080 (+) 477 WP_050201876.1 hypothetical protein -

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=1043547 ACD269_RS10960 WP_000410384.1 2127750..2128508(+) (spo0J) [Streptococcus pneumoniae strain FC2]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHTEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLEALLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=1043547 ACD269_RS10960 WP_000410384.1 2127750..2128508(+) (spo0J) [Streptococcus pneumoniae strain FC2]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
ACTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCGATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATACTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAGCTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(144-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C1CBL7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.593

100

0.508

Multiple sequence alignment