Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   ACD269_RS09310 Genome accession   NZ_CP168260
Coordinates   1805321..1805941 (-) Length   206 a.a.
NCBI ID   WP_000839908.1    Uniprot ID   A0A0B7M636
Organism   Streptococcus pneumoniae strain FC2     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1800321..1810941
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACD269_RS09285 (ACD269_09285) recA 1800698..1801864 (-) 1167 WP_001085463.1 recombinase RecA Machinery gene
  ACD269_RS09290 (ACD269_09290) cinA 1801919..1803175 (-) 1257 WP_050118943.1 competence/damage-inducible protein A Machinery gene
  ACD269_RS09295 (ACD269_09295) - 1803260..1804276 (-) 1017 WP_000239278.1 LCP family protein -
  ACD269_RS09300 (ACD269_09300) - 1804284..1804802 (-) 519 WP_000455530.1 GNAT family N-acetyltransferase -
  ACD269_RS09305 (ACD269_09305) tsaE 1804792..1805235 (-) 444 WP_000275588.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  ACD269_RS09310 (ACD269_09310) comM 1805321..1805941 (-) 621 WP_000839908.1 hypothetical protein Regulator
  ACD269_RS09315 (ACD269_09315) - 1806324..1807187 (-) 864 Protein_1823 helix-turn-helix domain-containing protein -
  ACD269_RS09320 (ACD269_09320) - 1807376..1807546 (+) 171 WP_000742180.1 PhrA family quorum-sensing system peptide -
  ACD269_RS09325 (ACD269_09325) - 1807691..1809706 (+) 2016 WP_050072292.1 bacteriocin-associated integral membrane family protein -
  ACD269_RS09330 (ACD269_09330) - 1809708..1810340 (+) 633 WP_000571415.1 ABC transporter ATP-binding protein -
  ACD269_RS09335 (ACD269_09335) - 1810481..1810759 (+) 279 WP_000712962.1 hypothetical protein -

Sequence

Protein


Download         Length: 206 a.a.        Molecular weight: 23552.72 Da        Isoelectric Point: 10.1254

>NTDB_id=1043521 ACD269_RS09310 WP_000839908.1 1805321..1805941(-) (comM) [Streptococcus pneumoniae strain FC2]
MKSMRILFLLALIQISLSSCFLWKECILSFKQSTAFFIGSMVFVSGICAGVNYLYTRKQEVHSVLASKKSVKLFYSMLLL
INLLGAVLVLSDNLFIKNTLQQELVDFLLPSFFFLFGLDLLIFLPLKKYVRDFLAMLDRKKTVLVTILATLLFLRNPMTI
VSLLIYIGLGLFFAAYLVPNSVKKEVSFYGHIFRDLVLVIVTLIFF

Nucleotide


Download         Length: 621 bp        

>NTDB_id=1043521 ACD269_RS09310 WP_000839908.1 1805321..1805941(-) (comM) [Streptococcus pneumoniae strain FC2]
ATGAAATCAATGAGAATCTTATTTTTGTTAGCTTTAATTCAAATCAGTTTGAGTAGCTGTTTCTTATGGAAGGAATGCAT
CTTGTCCTTTAAACAAAGTACAGCTTTTTTCATCGGAAGCATGGTTTTCGTTTCAGGAATCTGTGCTGGAGTAAATTATC
TTTATACCCGTAAGCAAGAAGTCCATAGTGTCCTAGCCAGTAAGAAGTCGGTGAAGCTTTTTTACAGTATGTTACTCTTA
ATTAATTTGTTAGGAGCTGTTCTTGTTTTGTCAGATAACTTGTTCATCAAAAATACGCTGCAGCAAGAATTAGTTGACTT
TTTATTGCCATCCTTCTTTTTCCTATTTGGGCTAGATTTGCTGATTTTTTTACCCTTGAAAAAATACGTGCGCGATTTTC
TTGCTATGCTAGACAGAAAAAAGACAGTGTTGGTGACTATTTTAGCAACACTTCTTTTCTTAAGAAATCCAATGACCATT
GTCTCACTTCTGATTTATATTGGACTGGGCTTGTTTTTTGCAGCCTATCTTGTCCCAAATTCGGTTAAGAAGGAAGTTTC
CTTTTATGGTCATATTTTCCGAGATCTTGTATTGGTCATTGTTACGCTCATTTTCTTTTAG

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0B7M636

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

100

100

1
  comM Streptococcus pneumoniae R6

100

100

1
  comM Streptococcus pneumoniae TIGR4

100

100

1
  comM Streptococcus mitis NCTC 12261

38.974

94.66

0.369
  comM Streptococcus mitis SK321

38.974

94.66

0.369

Multiple sequence alignment