Detailed information    

insolico Bioinformatically predicted

Overview

Name   crp   Type   Regulator
Locus tag   ACEN3H_RS12195 Genome accession   NZ_CP168231
Coordinates   2586458..2587165 (+) Length   235 a.a.
NCBI ID   WP_016141682.1    Uniprot ID   A0A151YV95
Organism   Acinetobacter lactucae strain 2024CK-01095     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2581458..2592165
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACEN3H_RS12170 (ACEN3H_12170) clpB 2581611..2584190 (-) 2580 WP_005070314.1 ATP-dependent chaperone ClpB -
  ACEN3H_RS12175 (ACEN3H_12175) - 2584490..2585299 (+) 810 WP_373357754.1 peptidoglycan DD-metalloendopeptidase family protein -
  ACEN3H_RS12180 (ACEN3H_12180) - 2585296..2585501 (-) 206 Protein_2382 hypothetical protein -
  ACEN3H_RS12185 (ACEN3H_12185) - 2585597..2586019 (-) 423 WP_016143298.1 OsmC family protein -
  ACEN3H_RS12190 (ACEN3H_12190) - 2586098..2586217 (-) 120 WP_078224862.1 hypothetical protein -
  ACEN3H_RS12195 (ACEN3H_12195) crp 2586458..2587165 (+) 708 WP_016141682.1 cAMP-activated global transcriptional regulator CRP Regulator
  ACEN3H_RS12200 (ACEN3H_12200) - 2587325..2588373 (+) 1049 Protein_2386 NADP(H)-dependent aldo-keto reductase -
  ACEN3H_RS12205 (ACEN3H_12205) - 2588429..2589208 (-) 780 WP_016143296.1 M48 family metallopeptidase -
  ACEN3H_RS12210 (ACEN3H_12210) - 2589324..2589641 (-) 318 WP_031947796.1 hypothetical protein -
  ACEN3H_RS12215 (ACEN3H_12215) - 2589763..2591082 (-) 1320 WP_200044428.1 adenylosuccinate synthase -

Sequence

Protein


Download         Length: 235 a.a.        Molecular weight: 26522.10 Da        Isoelectric Point: 4.6573

>NTDB_id=1043321 ACEN3H_RS12195 WP_016141682.1 2586458..2587165(+) (crp) [Acinetobacter lactucae strain 2024CK-01095]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDASLEENPVSDDDYDDEE

Nucleotide


Download         Length: 708 bp        

>NTDB_id=1043321 ACEN3H_RS12195 WP_016141682.1 2586458..2587165(+) (crp) [Acinetobacter lactucae strain 2024CK-01095]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCCCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGATGATGAACGTGAAATTGTTGTTGCGTATTTAAATCCGGGCGATTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCCGAAGTTCGTACTCGTGATGTCTGTGAAATTGCAGA
GATCTCTTATGACAACTTCCACGAACTTAGCAAACAATATCCAGACCTAAGCTATGCTGTTTTTGCACAATTAGTTCGCC
GTCTAAAAAATACGACACGTAAAATGACAGATCTTGCTTTCATTGATGTGTCTGGTCGTATTGCTCGTTGTTTAATCGAT
CTATCTTCTCAGCCAGAAGCAATGATTTTGCCGAATGGTCGTCAAATTCGTATTACTCGTCAAGAAATTGGCCGTATTGT
TGGATGCTCACGTGAGATGGTTGGCCGTGTACTCAAAACCTTAGAAGATCAAGGTATGATCCAAACTGATGGTAAAGCTA
TTCTTATTTTTGATGCTTCATTAGAAGAAAACCCTGTTTCTGATGATGACTACGACGATGAAGAATAA

Domains

Predicted by InterproScan.

Cyclic nucleotide-binding domain (cNMP_binding)

(33-120)

Crp-like helix-turn-helix domain (HTH_Crp_2)

(152-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A151YV95

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  crp Acinetobacter baumannii D1279779

97.872

100

0.979
  crp Vibrio cholerae strain A1552

47.087

87.66

0.413
  crp Haemophilus influenzae Rd KW20

48.718

82.979

0.404

Multiple sequence alignment