Detailed information NTG1042406

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: AB9L17_RS04285
• Genome accession: NZ_CP168124
• Coordinates: 872371..873084 (+)
• Length: 237 a.a.
• NCBI ID: WP_068983389.1
• Uniprot ID: -
• Organism: Bacillus sp. RS11
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 867371..878084

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9L17_RS04260 (AB9L17_04260)	-	868299..869171 (-)	873	WP_223552860.1	glycine betaine ABC transporter substrate-binding protein	-
AB9L17_RS04265 (AB9L17_04265)	-	869511..870428 (+)	918	WP_375200132.1	ATP-binding cassette domain-containing protein	-
AB9L17_RS04270 (AB9L17_04270)	-	870425..871177 (+)	753	WP_068983392.1	ABC transporter permease	-
AB9L17_RS04275 (AB9L17_04275)	-	871190..871921 (+)	732	WP_223552856.1	ABC transporter permease	-
AB9L17_RS04280 (AB9L17_04280)	-	871942..872292 (+)	351	WP_223552854.1	YxeA family protein	-
AB9L17_RS04285 (AB9L17_04285)	scnR	872371..873084 (+)	714	WP_068983389.1	response regulator transcription factor	Regulator
AB9L17_RS04290 (AB9L17_04290)	-	873085..874464 (+)	1380	WP_068983388.1	sensor histidine kinase KdpD	-
AB9L17_RS04295 (AB9L17_04295)	-	875751..877244 (+)	1494	WP_375200133.1	helix-turn-helix domain-containing protein	-
AB9L17_RS04300 (AB9L17_04300)	-	877350..877814 (+)	465	Protein_787	protoglobin domain-containing protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26939.31 Da
• Isoelectric Point: 5.2020

>NTDB_id=1042406 AB9L17_RS04285 WP_068983389.1 872371..873084(+) (scnR) [Bacillus sp. RS11]
MVNLKDKKILIVDDEPEIRKMIESFLRKEGFFRIYNATDCSSALSICQTDKPDIAILDVMLPDGDGFSLLSSIRQFSEMP
VLFLSARGEDEDRLLGLGLGADDYIVKPFLPRELVLRLMAILKRVYSSHILEQLSVFQLGEQTINLESAVVYGNQKELPL
TAKEHAILVKLYENQGRIVTSDALCQAVWGDDSYGYENTLMVHIRRVREKIEVDPSKPLYLLTVRGLGYKLLVKETR

Nucleotide

• Length: 714 bp

>NTDB_id=1042406 AB9L17_RS04285 WP_068983389.1 872371..873084(+) (scnR) [Bacillus sp. RS11]
ATGGTAAATTTAAAAGACAAAAAAATATTAATAGTAGATGATGAACCGGAAATTAGAAAAATGATTGAAAGCTTTTTAAG
AAAAGAGGGCTTTTTCCGTATATATAATGCAACTGACTGCAGTTCTGCCCTGTCAATCTGCCAAACAGATAAGCCTGATA
TAGCTATTCTCGACGTCATGTTACCTGATGGCGATGGATTCTCACTTTTGTCTTCCATCAGACAGTTCTCAGAAATGCCA
GTCCTTTTCCTTTCTGCACGGGGCGAGGATGAAGATCGTTTACTCGGACTTGGCTTGGGGGCAGATGATTATATTGTGAA
ACCGTTCCTACCGCGTGAACTAGTTTTAAGGCTTATGGCCATTCTGAAAAGGGTCTACTCCTCTCATATTTTGGAACAAT
TGTCTGTTTTTCAATTAGGCGAACAGACTATTAATCTAGAAAGTGCTGTCGTATACGGGAATCAAAAGGAGTTACCATTG
ACGGCAAAGGAGCACGCTATACTTGTGAAATTGTATGAAAATCAAGGGAGAATCGTTACAAGCGATGCCTTATGCCAGGC
CGTCTGGGGAGATGACAGCTACGGTTACGAAAATACATTGATGGTCCACATAAGGCGGGTTCGTGAAAAAATCGAGGTGG
ATCCATCCAAACCACTTTATCTTCTTACTGTCAGGGGACTGGGATATAAACTGTTAGTGAAGGAGACGCGTTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.431	97.89	0.494
micA	Streptococcus pneumoniae Cp1015	41.228	96.203	0.397
vicR	Streptococcus mutans UA159	40.611	96.624	0.392