Detailed information NTG1042336

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACCE15_RS17080
• Genome accession: NZ_CP168118
• Coordinates: 3850232..3852454 (-)
• Length: 740 a.a.
• NCBI ID: WP_372821227.1
• Uniprot ID: -
• Organism: Pseudomonas parafulva strain SE729
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3845232..3857454

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACCE15_RS17045 (ACCE15_17045)	murB	3845592..3846611 (-)	1020	WP_112897749.1	UDP-N-acetylmuramate dehydrogenase	-
ACCE15_RS17050 (ACCE15_17050)	-	3846608..3847072 (-)	465	WP_125930436.1	low molecular weight protein-tyrosine-phosphatase	-
ACCE15_RS17055 (ACCE15_17055)	kdsB	3847072..3847836 (-)	765	WP_125930437.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACCE15_RS17060 (ACCE15_17060)	-	3847833..3848018 (-)	186	WP_054893060.1	Trm112 family protein	-
ACCE15_RS17065 (ACCE15_17065)	lpxK	3848060..3849055 (-)	996	WP_125930438.1	tetraacyldisaccharide 4'-kinase	-
ACCE15_RS17070 (ACCE15_17070)	-	3849055..3849489 (-)	435	WP_054893058.1	biopolymer transporter ExbD	-
ACCE15_RS17075 (ACCE15_17075)	exbB	3849486..3850121 (-)	636	WP_054893125.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACCE15_RS17080 (ACCE15_17080)	comA	3850232..3852454 (-)	2223	WP_372821227.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACCE15_RS17085 (ACCE15_17085)	-	3852597..3853223 (+)	627	WP_151924181.1	DUF2062 domain-containing protein	-
ACCE15_RS17090 (ACCE15_17090)	-	3853107..3853886 (-)	780	WP_054893055.1	ABC transporter permease	-
ACCE15_RS17095 (ACCE15_17095)	-	3853883..3854815 (-)	933	WP_063543816.1	ABC transporter ATP-binding protein	-
ACCE15_RS17100 (ACCE15_17100)	-	3854963..3855586 (-)	624	WP_065861209.1	glutathione S-transferase	-

Sequence

Protein

• Length: 740 a.a.
• Molecular weight: 80666.71 Da
• Isoelectric Point: 10.9617

>NTDB_id=1042336 ACCE15_RS17080 WP_372821227.1 3850232..3852454(-) (comA) [Pseudomonas parafulva strain SE729]
MRTGMSALALGLLSLGLLPALPSVGWLFLLFLSALMCLFTRVWPIGWFLLGLSWACWSAQQALDDRLIAELDGRTLWLEG
RVTGLATQSGRSVRFELDEAQSRRAKLPRRMQLSWFDGPMVRTGERWRLAVNLRRPHGLLNPHGPDREAMLLARRIGATG
TVKAGEMLAPASGGWRDRLRQRLLAVDAQGREVVLAALVLGDGSGLAREDWQALQATGTVHLMVISGQHIGLLAGLIYGL
VAGLARLGAWPGRLPWLPWACGLAMAAALAYGALAGFQVPVQRACLMLATVLVWRLRFRHLGAFFPLLLALVGVLLFEPL
ASLMPGFWLSFAAVAVLIYCFSARLGGWRPWQAWSRAQWVIAIGLLPAMLALGLPVSLSAPLVNLLAVPWISLAVLPLAL
LGAATLPLAGVGESLLWLAGGLIDLMFRALGLLAEWRPPWTPPPLSLWAWTLVCAGALLLLLPRGVPLRGLGAVMLLALW
APREQVPHAEVEVWQLDVGQGLAVLLRTRHHSLLYDAGPAMGTSDLGQTVVLPTLRRLGVNQLDLMLISHAHADHAGGAL
AVQRGLPVVRVLAGEARELPAVLDAQVCSSGERWEWDGVTFSLWHWPSGKNSNDRSCVLLVEAQGERLLLAGDMEAGAER
AWLESADAARIDWLQSPHHGSRSSSTEPFIRAIAPRGVMISRGRHNGFGHPHPQVIERYRRHGLAVHDTALQGALRLRLG
RHGEVEGLRAQRRFWREPPS

Nucleotide

• Length: 2223 bp

>NTDB_id=1042336 ACCE15_RS17080 WP_372821227.1 3850232..3852454(-) (comA) [Pseudomonas parafulva strain SE729]
ATGCGCACAGGGATGTCTGCGCTGGCGCTCGGGTTGTTGAGCCTGGGTCTCTTGCCTGCCTTGCCGTCGGTCGGATGGCT
GTTCCTTCTGTTCTTGTCGGCACTGATGTGCCTGTTCACTCGCGTCTGGCCGATAGGGTGGTTCCTGCTGGGGCTGAGCT
GGGCCTGCTGGTCGGCGCAGCAGGCCCTTGATGATCGCCTGATCGCCGAGCTCGATGGGCGCACGCTGTGGCTGGAGGGC
AGGGTGACGGGGCTGGCGACGCAGTCCGGGCGCAGCGTGCGTTTCGAGCTGGACGAGGCACAGTCCCGGCGTGCGAAGTT
ACCCCGCCGGATGCAACTGAGCTGGTTCGACGGTCCCATGGTCCGGACTGGCGAGCGCTGGCGGCTCGCGGTCAACCTCA
GACGCCCTCATGGGCTGCTCAATCCCCATGGTCCCGACCGCGAAGCGATGCTGCTGGCACGGCGCATTGGTGCCACAGGA
ACGGTCAAGGCCGGGGAGATGCTGGCCCCGGCGAGCGGGGGCTGGCGCGACAGGCTGCGCCAGCGCTTGCTGGCGGTGGA
CGCCCAAGGGCGGGAGGTGGTGCTGGCGGCGCTGGTGCTCGGTGACGGTTCTGGGCTGGCGCGGGAGGACTGGCAGGCCT
TGCAGGCGACCGGCACCGTGCACCTGATGGTGATTTCGGGGCAGCACATTGGCTTGCTGGCGGGGCTGATCTATGGGCTG
GTTGCCGGACTGGCCCGTCTGGGTGCCTGGCCAGGGAGGCTACCGTGGTTGCCCTGGGCGTGCGGCCTGGCGATGGCAGC
AGCCTTGGCCTATGGCGCCCTGGCTGGCTTTCAGGTGCCGGTGCAGCGTGCATGCCTGATGCTGGCCACTGTCTTGGTCT
GGCGTCTGCGCTTTCGTCATCTGGGGGCGTTCTTCCCCTTGTTGCTGGCTTTGGTAGGTGTATTGCTGTTCGAGCCCCTG
GCCAGCCTGATGCCGGGCTTCTGGCTGTCTTTCGCGGCGGTGGCAGTGCTGATCTACTGCTTCAGCGCGCGTCTGGGTGG
CTGGCGGCCCTGGCAGGCCTGGAGTCGTGCTCAATGGGTGATCGCCATCGGTTTGCTGCCCGCGATGCTGGCGCTGGGTC
TGCCTGTTAGCCTCAGCGCGCCGTTGGTCAATCTCCTGGCAGTACCCTGGATCAGCCTGGCGGTGTTGCCATTGGCCCTG
CTCGGAGCGGCGACGCTGCCGTTGGCAGGGGTGGGGGAATCGTTGCTGTGGCTGGCAGGTGGGTTGATCGACCTGATGTT
TCGCGCGCTCGGCCTGCTGGCCGAATGGCGTCCACCCTGGACGCCCCCGCCGCTTTCGCTGTGGGCGTGGACGCTGGTGT
GTGCGGGCGCGTTGCTGCTCTTGCTGCCACGCGGCGTGCCGCTGCGAGGACTGGGGGCGGTGATGCTGCTGGCGCTGTGG
GCGCCTCGCGAGCAGGTGCCGCACGCAGAGGTGGAAGTCTGGCAACTGGACGTTGGCCAAGGCTTGGCGGTGCTGTTGCG
CACGCGGCATCACAGCCTGCTTTACGATGCCGGGCCGGCGATGGGCACCAGTGACCTTGGGCAGACCGTGGTGCTGCCGA
CCTTGCGCAGGCTGGGTGTCAACCAGCTCGATCTGATGCTGATCAGCCATGCACATGCCGACCACGCCGGCGGCGCTCTC
GCCGTGCAGCGCGGCCTGCCGGTGGTGCGGGTGCTGGCTGGCGAAGCACGGGAGTTGCCCGCAGTCTTGGACGCGCAGGT
GTGCAGCAGTGGTGAGCGCTGGGAGTGGGATGGCGTGACTTTCTCGCTGTGGCACTGGCCCAGTGGCAAGAACAGCAACG
ACCGCTCCTGTGTGCTGCTGGTCGAGGCCCAGGGTGAGCGCTTGCTGCTGGCTGGCGACATGGAGGCCGGTGCCGAGCGT
GCCTGGCTGGAGTCCGCCGATGCGGCGCGTATCGACTGGCTGCAGTCCCCGCATCATGGTAGCCGTAGTTCCTCCACCGA
GCCTTTCATCCGCGCCATCGCGCCGCGTGGCGTGATGATTTCCCGTGGGCGACACAATGGTTTCGGTCACCCGCACCCGC
AGGTGATCGAGCGCTATCGGCGGCATGGGCTGGCAGTGCATGACACGGCACTGCAAGGGGCGCTGCGCCTGCGACTGGGT
AGGCACGGAGAGGTCGAGGGATTGCGTGCGCAGCGGCGCTTCTGGCGTGAGCCGCCTTCCTAG

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (20-166)

• Competence protein (Competence) (198-463)

• Metallo-beta-lactamase superfamily (Lactamase_B) (497-679)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	60.362	97.162	0.586
comA	Ralstonia pseudosolanacearum GMI1000	35.026	100	0.364