Detailed information NTG1041709

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KJP56_RS15130
• Genome accession: NZ_OX419652
• Coordinates: 2805613..2806218 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis isolate NRS6131
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2800613..2811218

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP56_RS15100 (NRS6131_14985)	-	2801426..2801815 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
KJP56_RS15105 (NRS6131_14990)	yajC	2801872..2802138 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KJP56_RS15110 (NRS6131_14995)	tgt	2802175..2803320 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KJP56_RS15115 (NRS6131_15000)	queA	2803347..2804375 (-)	1029	WP_213419149.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KJP56_RS15120 (NRS6131_15005)	yrzS	2804405..2804605 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KJP56_RS15125 (NRS6131_15010)	ruvB	2804598..2805602 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KJP56_RS15130 (NRS6131_15015)	ruvA	2805613..2806218 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
KJP56_RS15135 (NRS6131_15020)	bofC	2806357..2806869 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KJP56_RS15140 (NRS6131_15025)	csbX	2806917..2808224 (-)	1308	WP_213419150.1	MFS transporter	-
KJP56_RS15145 (NRS6131_15030)	iolG	2808295..2809320 (-)	1026	WP_032726305.1	inositol 2-dehydrogenase	-
KJP56_RS15150 (NRS6131_15035)	yrzF	2809558..2810205 (+)	648	WP_021480227.1	phosphotransferase	-
KJP56_RS15155 (NRS6131_15040)	-	2810251..2810373 (-)	123	WP_003229707.1	hypothetical protein	-
KJP56_RS15160	-	2810458..2810532 (+)	75	Protein_2942	hypothetical protein	-
KJP56_RS15165	-	2810536..2810682 (+)	147	WP_348984799.1	DUF5412 family protein	-
KJP56_RS15170 (NRS6131_15045)	-	2810631..2810903 (+)	273	WP_348984800.1	DUF5412 family protein	-
KJP56_RS15175 (NRS6131_15050)	-	2810910..2811050 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=1041709 KJP56_RS15130 WP_003229717.1 2805613..2806218(-) (ruvA) [Bacillus subtilis isolate NRS6131]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=1041709 KJP56_RS15130 WP_003229717.1 2805613..2806218(-) (ruvA) [Bacillus subtilis isolate NRS6131]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408