Detailed information NTG1041329

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: ACDJ58_RS00790
• Genome accession: NZ_CP168020
• Coordinates: 131916..132629 (+)
• Length: 237 a.a.
• NCBI ID: WP_413374700.1
• Uniprot ID: -
• Organism: Paenibacillus taichungensis strain Cl17b
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 126916..137629

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDJ58_RS00765 (ACDJ58_00765)	-	127621..128877 (+)	1257	WP_413374690.1	DUF445 domain-containing protein	-
ACDJ58_RS00770 (ACDJ58_00770)	-	128965..129318 (-)	354	WP_413374692.1	YxeA family protein	-
ACDJ58_RS00775 (ACDJ58_00775)	-	129347..130078 (-)	732	WP_413374694.1	ABC transporter permease	-
ACDJ58_RS00780 (ACDJ58_00780)	-	130091..130840 (-)	750	WP_413374696.1	ABC transporter permease	-
ACDJ58_RS00785 (ACDJ58_00785)	-	130840..131757 (-)	918	WP_413374698.1	ABC transporter ATP-binding protein	-
ACDJ58_RS00790 (ACDJ58_00790)	scnR	131916..132629 (+)	714	WP_413374700.1	response regulator transcription factor	Regulator
ACDJ58_RS00795 (ACDJ58_00795)	-	132629..134011 (+)	1383	WP_413374702.1	sensor histidine kinase	-
ACDJ58_RS00800 (ACDJ58_00800)	-	134288..134470 (+)	183	WP_413374704.1	type A2 lanthipeptide	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26955.40 Da
• Isoelectric Point: 5.0653

>NTDB_id=1041329 ACDJ58_RS00790 WP_413374700.1 131916..132629(+) (scnR) [Paenibacillus taichungensis strain Cl17b]
MELMKNKKILIVDDEPEIREMIERFLRKEGFFRVYTADNFVNALAVCRLEKPDAAILDVMLPDGDGFSLLSSIRSFSDMP
VLFLSARGEDEDRLLGLGLGADDYMVKPFLPRELILRLMAILKRVYASNTVERLPVFRLGGQIVDLESAVVQGTGREFPL
TAKEHAILIKLYENQGRIVTSDALCQAVWGDESYGYENTLMVHVRRIREKIEDDPSKPIFLLTVRGLGYKLMVPESR

Nucleotide

• Length: 714 bp

>NTDB_id=1041329 ACDJ58_RS00790 WP_413374700.1 131916..132629(+) (scnR) [Paenibacillus taichungensis strain Cl17b]
ATGGAATTAATGAAAAATAAGAAAATACTGATCGTTGATGATGAACCCGAAATACGGGAAATGATTGAGCGTTTTTTACG
TAAAGAAGGTTTTTTTCGGGTATATACAGCTGATAACTTCGTGAATGCTCTGGCGGTATGCAGACTAGAAAAGCCGGATG
CTGCCATCCTGGATGTGATGCTTCCGGATGGAGATGGTTTCTCTCTGCTCTCTTCAATTCGATCATTCTCAGATATGCCC
GTTCTGTTCCTGTCTGCACGTGGTGAAGATGAGGATCGACTGCTCGGTTTGGGGCTGGGAGCAGATGATTACATGGTCAA
ACCCTTTCTTCCAAGGGAGTTGATTCTTCGGCTGATGGCAATTCTGAAAAGGGTATATGCCTCTAACACGGTAGAGAGAT
TGCCTGTATTTCGTTTGGGTGGACAAATTGTTGATTTGGAGAGCGCTGTTGTGCAGGGGACAGGTAGGGAGTTTCCACTG
ACAGCTAAGGAGCACGCCATACTGATCAAGTTGTATGAGAATCAGGGCCGAATTGTAACCAGTGATGCATTGTGTCAAGC
CGTATGGGGAGACGAGAGTTATGGTTACGAAAATACATTGATGGTGCATGTGAGGCGGATCAGGGAGAAGATCGAGGATG
ACCCGTCAAAACCGATATTTTTGCTAACCGTTCGGGGGCTTGGTTATAAACTGATGGTTCCGGAGTCTCGGTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (155-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	50.655	96.624	0.489
micA	Streptococcus pneumoniae Cp1015	41.667	96.203	0.401
vicR	Streptococcus mutans UA159	40.175	96.624	0.388