Detailed information NTG1041240

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: ACDZ08_RS07350
• Genome accession: NZ_CP168014
• Coordinates: 1533507..1534004 (-)
• Length: 165 a.a.
• NCBI ID: WP_029694050.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain sa230627_barcode16
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1528507..1539004

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACDZ08_RS07325 (ACDZ08_07325)	gcvPB	1528669..1530141 (-)	1473	WP_000202188.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
ACDZ08_RS07330 (ACDZ08_07330)	gcvPA	1530134..1531480 (-)	1347	WP_000019691.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
ACDZ08_RS07335 (ACDZ08_07335)	gcvT	1531500..1532591 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
ACDZ08_RS07340 (ACDZ08_07340)	-	1532750..1533274 (-)	525	WP_001015121.1	shikimate kinase	-
ACDZ08_RS07345 (ACDZ08_07345)	-	1533264..1533410 (-)	147	WP_001789879.1	hypothetical protein	-
ACDZ08_RS07350 (ACDZ08_07350)	comGF	1533507..1534004 (-)	498	WP_029694050.1	competence type IV pilus minor pilin ComGF	Machinery gene
ACDZ08_RS07355 (ACDZ08_07355)	comGE	1533922..1534221 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
ACDZ08_RS07360 (ACDZ08_07360)	comGD	1534208..1534654 (-)	447	WP_072433556.1	competence type IV pilus minor pilin ComGD	Machinery gene
ACDZ08_RS07365 (ACDZ08_07365)	comGC	1534632..1534943 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
ACDZ08_RS07370 (ACDZ08_07370)	comGB	1534957..1536027 (-)	1071	WP_000776421.1	competence type IV pilus assembly protein ComGB	Machinery gene
ACDZ08_RS07375 (ACDZ08_07375)	comGA	1535999..1536973 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
ACDZ08_RS07380 (ACDZ08_07380)	-	1537025..1537648 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
ACDZ08_RS07385 (ACDZ08_07385)	-	1537645..1537974 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
ACDZ08_RS07390 (ACDZ08_07390)	-	1537974..1538960 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19199.92 Da
• Isoelectric Point: 10.2192

>NTDB_id=1041240 ACDZ08_RS07350 WP_029694050.1 1533507..1534004(-) (comGF) [Staphylococcus aureus strain sa230627_barcode16]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIELRQQRIILHKGEEMIEYKLINNKIIKVVNDRGNITMINNVTSFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1041240 ACDZ08_RS07350 WP_029694050.1 1533507..1534004(-) (comGF) [Staphylococcus aureus strain sa230627_barcode16]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACGATATTGAACTTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCGAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CTTCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (68-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	96.97	100	0.97
comGF	Staphylococcus aureus N315	96.97	100	0.97