Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   KJP51_RS16120 Genome accession   NZ_OX419576
Coordinates   3108176..3109036 (-) Length   286 a.a.
NCBI ID   WP_192857944.1    Uniprot ID   -
Organism   Bacillus subtilis isolate NRS6105     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 3103176..3114036
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP51_RS16085 (NRS6105_15955) mrpE 3103414..3103890 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  KJP51_RS16090 (NRS6105_15960) mrpF 3103890..3104174 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  KJP51_RS16095 (NRS6105_15965) mnhG 3104158..3104532 (+) 375 WP_015714623.1 monovalent cation/H(+) antiporter subunit G -
  KJP51_RS16100 (NRS6105_15970) yuxO 3104571..3104951 (-) 381 WP_003228810.1 hotdog fold thioesterase -
  KJP51_RS16105 (NRS6105_15975) comA 3104970..3105614 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  KJP51_RS16110 (NRS6105_15980) comP 3105695..3107992 (-) 2298 WP_033884760.1 histidine kinase Regulator
  KJP51_RS16115 (NRS6105_15985) comX 3108000..3108161 (-) 162 WP_003228803.1 competence pheromone ComX -
  KJP51_RS16120 (NRS6105_15990) comQ 3108176..3109036 (-) 861 WP_192857944.1 polyprenyl synthetase family protein Regulator
  KJP51_RS16125 (NRS6105_15995) degQ 3109221..3109361 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  KJP51_RS16130 - 3109583..3109708 (+) 126 WP_003228793.1 hypothetical protein -
  KJP51_RS16135 (NRS6105_16000) - 3109822..3110190 (+) 369 WP_014477834.1 hypothetical protein -
  KJP51_RS16140 (NRS6105_16005) pdeH 3110166..3111395 (-) 1230 WP_003228790.1 cyclic di-GMP phosphodiesterase -
  KJP51_RS16145 (NRS6105_16010) pncB 3111532..3113004 (-) 1473 WP_003228788.1 nicotinate phosphoribosyltransferase -
  KJP51_RS16150 (NRS6105_16015) pncA 3113020..3113571 (-) 552 WP_015714627.1 isochorismatase family cysteine hydrolase -

Sequence


Protein


Download         Length: 286 a.a.        Molecular weight: 32525.39 Da        Isoelectric Point: 4.6134

>NTDB_id=1040967 KJP51_RS16120 WP_192857944.1 3108176..3109036(-) (comQ) [Bacillus subtilis isolate NRS6105]
MKEIVSQKIMNQDLERYLQNFIESKDTFEFADLALHHYLAFNGQDQKAIELLAAGIELLILSFDIYDDLEDQDNGSAVWM
KIDSSIALNAVTALYTLSIQVMCQASHEPEFSQEILNFALQSIQGQHDDIVNAPQTEEACLEMIKNKSGALTALPCVMGV
MLATGKYHPIVASYSYELGIIAQIENDYRGLYYLNNDFIQKKNTLAYLYLNKQFNDASAELLSLYQKPEEFVSINTKALK
RKLTEAGVIQYLLVMKHLSLQKIKNEMSQLKLEEDKTEKLLSVMIK

Nucleotide


Download         Length: 861 bp        

>NTDB_id=1040967 KJP51_RS16120 WP_192857944.1 3108176..3109036(-) (comQ) [Bacillus subtilis isolate NRS6105]
ATGAAGGAGATTGTAAGCCAAAAAATAATGAATCAGGACTTGGAACGATATCTTCAGAATTTTATTGAGTCTAAGGATAC
GTTTGAGTTTGCCGATTTGGCTCTTCATCATTATTTAGCTTTTAACGGTCAGGACCAAAAAGCAATCGAATTGCTAGCTG
CCGGAATTGAATTGCTTATACTCTCATTCGATATTTATGATGACTTAGAGGATCAAGATAATGGAAGTGCTGTCTGGATG
AAGATTGACTCGTCAATCGCTTTAAATGCAGTTACAGCTCTTTACACCCTAAGTATACAAGTGATGTGTCAAGCTAGTCA
TGAACCAGAATTTTCACAAGAGATATTGAATTTTGCGTTACAATCAATTCAAGGCCAGCATGATGATATTGTGAATGCGC
CGCAAACTGAAGAAGCCTGTCTTGAAATGATCAAAAATAAATCAGGAGCGCTAACGGCATTGCCCTGTGTAATGGGAGTA
ATGCTGGCAACAGGCAAATACCATCCCATTGTAGCTTCTTATTCTTATGAACTTGGGATTATTGCACAAATCGAAAATGA
TTACCGAGGTTTATATTATCTAAATAACGATTTTATTCAGAAGAAAAACACATTGGCATACTTATACTTAAATAAACAAT
TTAACGATGCTTCAGCGGAGCTACTAAGTTTATATCAAAAACCAGAGGAATTTGTTTCTATTAATACTAAGGCTTTGAAG
CGAAAATTGACAGAAGCAGGCGTTATACAATATTTACTGGTGATGAAACATTTATCTCTCCAAAAAATAAAAAATGAAAT
GTCACAATTAAAACTAGAAGAAGATAAAACTGAAAAATTATTGTCTGTTATGATTAAATAA

Domains


Predicted by InterProScan.

(39-229)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45.196

98.252

0.444


Multiple sequence alignment