Detailed information NTG1040490

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KJP59_RS14570
• Genome accession: NZ_OX419570
• Coordinates: 2779089..2779694 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis isolate NRS6134
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2774089..2784694

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP59_RS14540 (NRS6134_14445)	-	2774902..2775291 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
KJP59_RS14545 (NRS6134_14450)	yajC	2775348..2775614 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KJP59_RS14550 (NRS6134_14455)	tgt	2775651..2776796 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KJP59_RS14555 (NRS6134_14460)	queA	2776823..2777851 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KJP59_RS14560 (NRS6134_14465)	yrzS	2777881..2778081 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KJP59_RS14565 (NRS6134_14470)	ruvB	2778074..2779078 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KJP59_RS14570 (NRS6134_14475)	ruvA	2779089..2779694 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
KJP59_RS14575 (NRS6134_14480)	bofC	2779833..2780345 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KJP59_RS14580 (NRS6134_14485)	csbX	2780393..2781700 (-)	1308	WP_003246197.1	MFS transporter	-
KJP59_RS14585 (NRS6134_14490)	iolG	2781771..2782796 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
KJP59_RS14590 (NRS6134_14495)	yrzF	2783034..2783681 (+)	648	WP_003246159.1	phosphotransferase	-
KJP59_RS14595 (NRS6134_14500)	-	2783727..2783849 (-)	123	WP_003229707.1	hypothetical protein	-
KJP59_RS14600 (NRS6134_14505)	yrzH	2783934..2784224 (+)	291	WP_003246047.1	DUF5412 family protein	-
KJP59_RS14605	-	2784231..2784371 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=1040490 KJP59_RS14570 WP_003229717.1 2779089..2779694(-) (ruvA) [Bacillus subtilis isolate NRS6134]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=1040490 KJP59_RS14570 WP_003229717.1 2779089..2779694(-) (ruvA) [Bacillus subtilis isolate NRS6134]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408