Detailed information NTG1040175

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KJP42_RS14170
• Genome accession: NZ_OX419567
• Coordinates: 2721803..2722408 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis isolate NRS6107
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2716803..2727408

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP42_RS14140 (NRS6107_14025)	-	2717616..2718005 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
KJP42_RS14145 (NRS6107_14030)	yajC	2718062..2718328 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KJP42_RS14150 (NRS6107_14035)	tgt	2718365..2719510 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KJP42_RS14155 (NRS6107_14040)	queA	2719537..2720565 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KJP42_RS14160 (NRS6107_14045)	yrzS	2720595..2720795 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KJP42_RS14165 (NRS6107_14050)	ruvB	2720788..2721792 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KJP42_RS14170 (NRS6107_14055)	ruvA	2721803..2722408 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
KJP42_RS14175 (NRS6107_14060)	bofC	2722547..2723059 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KJP42_RS14180 (NRS6107_14065)	csbX	2723107..2724414 (-)	1308	WP_003246197.1	MFS transporter	-
KJP42_RS14185 (NRS6107_14070)	iolG	2724485..2725510 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
KJP42_RS14190 (NRS6107_14075)	yrzF	2725748..2726395 (+)	648	WP_003246159.1	phosphotransferase	-
KJP42_RS14195 (NRS6107_14080)	-	2726441..2726563 (-)	123	WP_003229707.1	hypothetical protein	-
KJP42_RS14200 (NRS6107_14085)	yrzH	2726648..2726938 (+)	291	WP_003246047.1	DUF5412 family protein	-
KJP42_RS14205	-	2726945..2727085 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=1040175 KJP42_RS14170 WP_003229717.1 2721803..2722408(-) (ruvA) [Bacillus subtilis isolate NRS6107]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=1040175 KJP42_RS14170 WP_003229717.1 2721803..2722408(-) (ruvA) [Bacillus subtilis isolate NRS6107]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408