Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACDW34_RS04565 Genome accession   NZ_CP167896
Coordinates   955723..956100 (+) Length   125 a.a.
NCBI ID   WP_130073892.1    Uniprot ID   -
Organism   Acinetobacter piscicola strain p38     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 950723..961100
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDW34_RS04550 (ACDW34_04550) - 951744..952838 (+) 1095 WP_372404099.1 hypothetical protein -
  ACDW34_RS04555 (ACDW34_04555) - 952901..954616 (-) 1716 WP_372404100.1 proline--tRNA ligase -
  ACDW34_RS04560 (ACDW34_04560) - 954797..955441 (-) 645 WP_372404101.1 hypothetical protein -
  ACDW34_RS04565 (ACDW34_04565) pilG 955723..956100 (+) 378 WP_130073892.1 twitching motility response regulator PilG Regulator
  ACDW34_RS04570 (ACDW34_04570) - 956127..956495 (+) 369 WP_130073891.1 response regulator -
  ACDW34_RS04575 (ACDW34_04575) - 956498..957031 (+) 534 WP_130073890.1 chemotaxis protein CheW -
  ACDW34_RS04580 (ACDW34_04580) - 957081..959153 (+) 2073 WP_130073889.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 125 a.a.        Molecular weight: 14042.20 Da        Isoelectric Point: 4.9264

>NTDB_id=1040164 ACDW34_RS04565 WP_130073892.1 955723..956100(+) (pilG) [Acinetobacter piscicola strain p38]
MEEKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIADANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGKVVGSDEYLTKPFSKDELLNAIRKHV

Nucleotide


Download         Length: 378 bp        

>NTDB_id=1040164 ACDW34_RS04565 WP_130073892.1 955723..956100(+) (pilG) [Acinetobacter piscicola strain p38]
ATGGAAGAAAAATTCCAAAATTTAAAAGTCATGGTTATCGATGATTCTAAAACGATTCGTCGAACGGCTGAAACACTATT
GCAGCGTGAAGGGTGTGAAGTCATCACTGCAGTAGATGGGTTTGAAGCACTTTCAAAAATTGCTGATGCGAATCCTGATA
TTGTTTTTGTTGATATTATGATGCCTCGATTAGATGGTTACCAAACTTGTGCTCTCATTAAAAATTCTCAGAGTTATCAA
AATATTCCTGTGATTATGCTGTCAAGTAAAGACGGTTTATTTGACCAAGCAAAAGGAAAGGTCGTAGGATCGGATGAGTA
TTTAACTAAACCATTTAGTAAAGATGAATTATTAAATGCTATTCGGAAACATGTTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.2

100

0.952
  vicR Streptococcus mutans UA159

41.88

93.6

0.392
  pilH Synechocystis sp. PCC 6803

41.228

91.2

0.376

Multiple sequence alignment