Detailed information
Bioinformatically predicted
Overview
| Name | comE1/comEA | Type | Machinery gene |
| Locus tag | ACDK45_RS03555 | Genome accession | NZ_CP167879 |
| Coordinates | 698990..699337 (+) | Length | 115 a.a. |
| NCBI ID | WP_005690826.1 | Uniprot ID | Q4QLQ4 |
| Organism | Haemophilus influenzae strain NTHi52 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 693990..704337
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ACDK45_RS03540 (ACDK45_03540) | - | 695735..697294 (+) | 1560 | WP_038441409.1 | phosphoethanolamine transferase | - |
| ACDK45_RS03545 (ACDK45_03545) | lspA | 697364..697879 (+) | 516 | WP_038441408.1 | signal peptidase II | - |
| ACDK45_RS03550 (ACDK45_03550) | ispH | 697876..698820 (+) | 945 | WP_005659294.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| ACDK45_RS03555 (ACDK45_03555) | comE1/comEA | 698990..699337 (+) | 348 | WP_005690826.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| ACDK45_RS03560 (ACDK45_03560) | thiB | 699584..700582 (+) | 999 | WP_011272345.1 | thiamine ABC transporter substrate binding subunit | - |
| ACDK45_RS03565 (ACDK45_03565) | thiP | 700587..702203 (+) | 1617 | WP_011272346.1 | thiamine/thiamine pyrophosphate ABC transporter permease | - |
| ACDK45_RS03570 (ACDK45_03570) | thiQ | 702187..702834 (+) | 648 | WP_038441405.1 | thiamine ABC transporter ATP-binding protein | - |
| ACDK45_RS03575 (ACDK45_03575) | bioB | 702947..703948 (+) | 1002 | WP_005655985.1 | biotin synthase BioB | - |
Sequence
Protein
Download Length: 115 a.a. Molecular weight: 12479.38 Da Isoelectric Point: 8.0084
>NTDB_id=1040089 ACDK45_RS03555 WP_005690826.1 698990..699337(+) (comE1/comEA) [Haemophilus influenzae strain NTHi52]
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
MKLMKTLFTSFVLCGSLAAGSTFAEDKVVEQTTQAVVTTQTDSQVAPAMMGDKLNINIATASEIQKSLTGIGAKKAEAIV
QYREKHGNFTNVEQLLEVQGIGKATLEKNRDRIIF
Nucleotide
Download Length: 348 bp
>NTDB_id=1040089 ACDK45_RS03555 WP_005690826.1 698990..699337(+) (comE1/comEA) [Haemophilus influenzae strain NTHi52]
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
ATGAAATTAATGAAAACATTATTCACTTCGTTTGTATTGTGTGGGTCACTTGCAGCTGGTTCCACTTTTGCTGAAGACAA
GGTGGTTGAGCAAACAACTCAAGCTGTTGTGACCACTCAAACGGATTCACAAGTAGCACCAGCTATGATGGGAGATAAAT
TGAATATTAACATAGCAACTGCCAGTGAAATTCAAAAATCCCTAACTGGCATTGGTGCGAAAAAAGCGGAAGCTATTGTG
CAATATCGTGAAAAACACGGTAATTTTACTAATGTAGAACAGCTTTTAGAAGTACAAGGAATTGGCAAAGCAACACTAGA
GAAAAATCGTGATCGTATAATCTTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE1/comEA | Haemophilus influenzae Rd KW20 |
81.25 |
97.391 |
0.791 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
57.944 |
93.043 |
0.539 |
| comEA | Vibrio campbellii strain DS40M4 |
38.393 |
97.391 |
0.374 |