Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   KJP66_RS21240 Genome accession   NZ_OX419563
Coordinates   4072011..4072700 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis isolate NRS6153     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4067011..4077700
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KJP66_RS21220 (NRS6153_21030) yxeA 4067916..4068263 (-) 348 WP_003227084.1 YxeA family protein -
  KJP66_RS21225 (NRS6153_21035) yxdM 4068277..4070145 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  KJP66_RS21230 (NRS6153_21040) yxdL 4070120..4070893 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  KJP66_RS21235 (NRS6153_21045) yxdK 4071037..4072014 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  KJP66_RS21240 (NRS6153_21050) braR 4072011..4072700 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  KJP66_RS21245 (NRS6153_21055) iolJ 4072808..4073680 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  KJP66_RS21250 (NRS6153_21060) iolI 4073701..4074537 (-) 837 WP_032730291.1 2-keto-myo-inositol isomerase -
  KJP66_RS21255 (NRS6153_21065) iolH 4074623..4075492 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  KJP66_RS21260 (NRS6153_21070) iolG 4075512..4076546 (-) 1035 WP_032730288.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=1039748 KJP66_RS21240 WP_003243527.1 4072011..4072700(-) (braR) [Bacillus subtilis isolate NRS6153]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=1039748 KJP66_RS21240 WP_003243527.1 4072011..4072700(-) (braR) [Bacillus subtilis isolate NRS6153]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406

Multiple sequence alignment