Detailed information    

insolico Bioinformatically predicted

Overview


Name   comA/comEC   Type   Machinery gene
Locus tag   ACDI99_RS10840 Genome accession   NZ_CP167783
Coordinates   2274001..2276442 (-) Length   813 a.a.
NCBI ID   WP_026443956.1    Uniprot ID   A0A062BYK1
Organism   Acinetobacter radioresistens strain E3263934     
Function   ssDNA transport through the inner membrane (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2269001..2281442
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACDI99_RS10815 (ACDI99_10815) purM 2269328..2270398 (+) 1071 WP_005019280.1 phosphoribosylformylglycinamidine cyclo-ligase -
  ACDI99_RS10820 (ACDI99_10820) purN 2270405..2271037 (+) 633 WP_005019279.1 phosphoribosylglycinamide formyltransferase -
  ACDI99_RS10825 (ACDI99_10825) - 2271097..2271894 (-) 798 WP_005019278.1 alpha/beta fold hydrolase -
  ACDI99_RS10830 (ACDI99_10830) sppA 2271912..2272928 (-) 1017 WP_005019276.1 signal peptide peptidase SppA -
  ACDI99_RS10835 (ACDI99_10835) - 2273058..2274008 (+) 951 WP_034675450.1 lysophospholipid acyltransferase family protein -
  ACDI99_RS10840 (ACDI99_10840) comA/comEC 2274001..2276442 (-) 2442 WP_026443956.1 DNA internalization-related competence protein ComEC/Rec2 Machinery gene
  ACDI99_RS10845 (ACDI99_10845) lolD 2276527..2277210 (-) 684 WP_005019272.1 lipoprotein-releasing ABC transporter ATP-binding protein LolD -
  ACDI99_RS10850 (ACDI99_10850) - 2277203..2278438 (-) 1236 WP_005019271.1 lipoprotein-releasing ABC transporter permease subunit -
  ACDI99_RS10855 (ACDI99_10855) - 2278464..2279036 (+) 573 WP_005019270.1 PilZ domain-containing protein -
  ACDI99_RS10860 (ACDI99_10860) - 2279046..2279972 (-) 927 WP_005027088.1 DMT family transporter -
  ACDI99_RS10865 (ACDI99_10865) - 2279969..2280439 (-) 471 WP_005019268.1 YaiI/YqxD family protein -

Sequence


Protein


Download         Length: 813 a.a.        Molecular weight: 92740.83 Da        Isoelectric Point: 8.8784

>NTDB_id=1039364 ACDI99_RS10840 WP_026443956.1 2274001..2276442(-) (comA/comEC) [Acinetobacter radioresistens strain E3263934]
MWKTILLAWIAGISVMGKTFNLPVFLLPGLMIFSVGSGLLYWYQYSKLESHHPIPWLSRAVFILALGILTGTLGYRYADH
ALEQRLDNRETETRNIEAIVYIRHIDERSEKQIRQKVEVLDQKKQPVQWWLTFKNIPEQPIKFELGEYYRIYGEVIPAHG
YAMPGVFDQEKWFIQQNIMASVKIWKIEKLDHEAVYRLGFNQYLNNQQGWINGLLLLMERQRYHFRTFIQNSTLKNKGLI
LALLTGDKSLLSSETEEQFQRLGISHLLAISGPHVLIFAALVSWVLQTLIRLYGPKLYLSLPRPYLLVFPFCFCVLLYSA
FVGFEIPALRTLLITLLGSSLLLLRQKIQALSLLLASASLLLWIDPFSVLSAAFWLSFGACFILLRIYESIDRQPAQPAF
NWKQRVLTAGKLLIESQGKIFIALFPLVLIFFKQVSWIAPLTNILVIPLLGAVVVPLDILAACLSYIISPLGLLLFHCSD
LGLNLGLWILEILDHLFNPQLQGIAFTPLLIVSLSIGLIILYLPRSVIPKAWALLCFVPVFTSRAPDSDFKLTVLDVGQG
QAILLQSSQQKIMLDTGGYYDETKFSIGQQILAPFLFSQGIARLDRVLLTHLDQDHSGALLPLSQKIKIDEVIANTQLPE
TWNIKQSSPCREGQSWSYQNFKVQVLSPGLNTYPSMVEANPNEYSCVLYVQLNQAQPYRNFLIMGDAGWPTEYELMKKYP
ELQVDVLVLGHHGSKHSSAYSFLKYLHPKLAIASAGQNNRYGHPTKEVKVRLKALDIPLLLTAQTGNIEFYQEADEQINY
TLYREQWKWLKIK

Nucleotide


Download         Length: 2442 bp        

>NTDB_id=1039364 ACDI99_RS10840 WP_026443956.1 2274001..2276442(-) (comA/comEC) [Acinetobacter radioresistens strain E3263934]
ATGTGGAAAACTATTTTATTGGCCTGGATTGCTGGAATCTCGGTCATGGGGAAAACTTTTAACTTACCTGTTTTTCTGTT
ACCTGGACTGATGATCTTCAGCGTAGGTTCAGGGCTATTATATTGGTATCAATATAGTAAGCTGGAGTCGCACCATCCGA
TTCCATGGTTATCTAGAGCAGTTTTTATTCTAGCCTTAGGCATCCTGACAGGCACATTGGGTTATCGCTACGCTGACCAT
GCGCTAGAACAACGTCTAGATAACAGGGAAACAGAAACAAGAAATATTGAGGCAATTGTTTATATCCGACATATTGATGA
GCGTTCTGAGAAGCAGATCAGGCAAAAAGTGGAAGTACTTGACCAGAAAAAACAGCCTGTTCAATGGTGGCTCACATTTA
AAAATATACCTGAGCAACCTATAAAATTTGAGTTAGGAGAATATTACCGGATTTATGGGGAAGTCATACCTGCTCATGGC
TATGCCATGCCGGGAGTATTTGATCAGGAAAAATGGTTTATTCAGCAGAATATCATGGCCAGTGTAAAAATCTGGAAAAT
AGAGAAATTGGACCATGAGGCAGTTTACCGGCTTGGTTTTAATCAATATCTGAATAATCAACAGGGTTGGATCAATGGTC
TTCTATTACTGATGGAGCGGCAGCGCTATCATTTTCGTACTTTTATTCAAAATAGCACACTGAAAAATAAAGGCCTGATT
TTAGCACTTCTTACAGGTGATAAAAGCTTACTTTCCTCTGAAACAGAAGAACAATTTCAGCGGCTGGGAATCAGTCACCT
GCTGGCAATTTCTGGCCCACACGTATTAATTTTCGCAGCTCTGGTCAGCTGGGTATTGCAAACCCTGATACGGCTGTATG
GTCCAAAACTCTATTTAAGCTTGCCTCGCCCTTATCTGCTGGTTTTTCCTTTCTGTTTTTGTGTATTACTTTACAGCGCT
TTTGTCGGTTTCGAGATTCCGGCACTACGAACACTGCTCATTACTCTGCTAGGGAGTAGCCTGCTTTTATTAAGACAAAA
AATCCAGGCATTAAGCTTATTGCTGGCAAGTGCCAGTTTACTATTATGGATAGATCCTTTTAGTGTTCTCTCGGCAGCTT
TCTGGCTTTCTTTCGGGGCCTGTTTTATTCTGTTGCGCATTTATGAAAGTATAGATCGGCAGCCTGCCCAACCGGCTTTT
AACTGGAAGCAAAGAGTTTTAACTGCTGGAAAGTTACTGATTGAATCACAAGGGAAAATTTTTATTGCTCTCTTTCCGTT
AGTACTGATTTTTTTCAAACAGGTAAGCTGGATTGCGCCATTGACCAATATTCTTGTCATTCCATTATTAGGTGCTGTCG
TAGTGCCGCTAGATATACTGGCTGCATGTCTTTCCTATATCATTTCTCCTTTGGGCCTGCTTTTATTTCATTGTAGCGAT
TTAGGCTTGAATTTAGGCTTGTGGATATTAGAAATACTGGACCATCTGTTTAATCCCCAATTACAGGGAATTGCATTTAC
ACCGTTGCTTATTGTGAGCCTCAGTATCGGCCTGATTATTTTATATCTGCCTCGATCTGTTATTCCTAAAGCTTGGGCGC
TGTTATGTTTTGTACCAGTTTTTACGAGTAGGGCACCAGACTCGGATTTTAAGTTAACCGTTTTAGATGTAGGGCAGGGC
CAAGCCATTCTACTTCAGAGTAGTCAGCAAAAAATAATGTTAGATACAGGCGGTTACTATGATGAAACCAAATTCAGTAT
AGGCCAGCAAATTCTTGCACCATTTTTATTTTCCCAAGGGATAGCTCGCTTAGATCGGGTGCTATTAACTCATCTGGATC
AGGATCATAGCGGGGCACTCTTACCATTAAGCCAAAAAATTAAAATCGATGAAGTAATAGCCAATACCCAGTTACCTGAA
ACATGGAATATAAAACAGTCATCACCATGCCGGGAAGGACAAAGCTGGTCTTATCAGAATTTTAAGGTCCAGGTACTATC
ACCTGGCTTAAATACTTACCCATCAATGGTAGAAGCCAATCCGAATGAATATTCATGTGTGTTATATGTGCAATTAAACC
AGGCCCAGCCTTACCGGAATTTCTTGATTATGGGAGATGCTGGCTGGCCAACTGAATATGAACTCATGAAAAAGTATCCC
GAACTTCAAGTCGACGTACTAGTATTGGGTCACCATGGCAGTAAGCACAGCTCTGCTTACAGTTTTCTAAAATATTTGCA
TCCTAAGCTGGCAATTGCCTCAGCAGGACAGAATAACCGTTATGGTCACCCGACCAAAGAAGTTAAGGTACGTCTAAAGG
CACTTGATATTCCACTTCTTTTAACTGCCCAAACCGGTAATATTGAATTTTATCAAGAAGCTGATGAACAAATAAATTAC
ACGCTCTATAGAGAGCAGTGGAAATGGTTAAAGATTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A062BYK1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comA/comEC Acinetobacter baylyi ADP1

50

100

0.506

  comA/comEC Acinetobacter baumannii strain A118

50.311

99.016

0.498

  comA/comEC Acinetobacter baumannii D1279779

50.311

99.016

0.498


Multiple sequence alignment