Detailed information NTG1038795

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ACBW56_RS16365
• Genome accession: NZ_CP167196
• Coordinates: 3319377..3320540 (+)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain FRI-TD24
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3314377..3325540

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACBW56_RS16345 (ACBW56_16345)	-	3314793..3315989 (+)	1197	WP_095315481.1	glycosyltransferase	-
ACBW56_RS16350 (ACBW56_16350)	-	3316122..3317198 (+)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
ACBW56_RS16355 (ACBW56_16355)	-	3317288..3318502 (-)	1215	WP_160249190.1	LCP family protein	-
ACBW56_RS16360 (ACBW56_16360)	-	3318507..3319154 (-)	648	WP_003151384.1	YigZ family protein	-
ACBW56_RS16365 (ACBW56_16365)	degS	3319377..3320540 (+)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
ACBW56_RS16370 (ACBW56_16370)	degU	3320617..3321306 (+)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ACBW56_RS16375 (ACBW56_16375)	-	3321404..3322252 (+)	849	WP_003151387.1	DegV family protein	-
ACBW56_RS16380 (ACBW56_16380)	comFA	3322360..3323745 (+)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
ACBW56_RS16385 (ACBW56_16385)	-	3323803..3324087 (+)	285	WP_003151389.1	late competence development ComFB family protein	-
ACBW56_RS16390 (ACBW56_16390)	comFC	3324093..3324782 (+)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
ACBW56_RS16395 (ACBW56_16395)	-	3324856..3325275 (+)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=1038795 ACBW56_RS16365 WP_003151385.1 3319377..3320540(+) (degS) [Bacillus velezensis strain FRI-TD24]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=1038795 ACBW56_RS16365 WP_003151385.1 3319377..3320540(+) (degS) [Bacillus velezensis strain FRI-TD24]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948