Detailed information NTG1038694

Bioinformatically predicted

Overview

• Name: pilP
• Type: Machinery gene
• Locus tag: ACBZ91_RS11245
• Genome accession: NZ_CP167179
• Coordinates: 2404244..2404759 (-)
• Length: 171 a.a.
• NCBI ID: WP_020334614.1
• Uniprot ID: A0AAN1CWV1
• Organism: Vibrio natriegens strain JSH01
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2399244..2409759

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACBZ91_RS11230 (ACBZ91_11230)	aroB	2400634..2401734 (-)	1101	WP_014233146.1	3-dehydroquinate synthase	-
ACBZ91_RS11235 (ACBZ91_11235)	aroK	2401766..2402284 (-)	519	WP_014233147.1	shikimate kinase AroK	-
ACBZ91_RS11240 (ACBZ91_11240)	pilQ	2402473..2404176 (-)	1704	WP_372378691.1	type IV pilus secretin PilQ	Machinery gene
ACBZ91_RS11245 (ACBZ91_11245)	pilP	2404244..2404759 (-)	516	WP_020334614.1	pilus assembly protein PilP	Machinery gene
ACBZ91_RS11250 (ACBZ91_11250)	pilO	2404749..2405342 (-)	594	WP_372377396.1	type 4a pilus biogenesis protein PilO	Machinery gene
ACBZ91_RS11255 (ACBZ91_11255)	pilN	2405335..2405910 (-)	576	WP_243975175.1	PilN domain-containing protein	Machinery gene
ACBZ91_RS11260 (ACBZ91_11260)	pilM	2405894..2406910 (-)	1017	WP_372377397.1	type IV pilus assembly protein PilM	Machinery gene
ACBZ91_RS11265 (ACBZ91_11265)	-	2407054..2409621 (+)	2568	WP_372377398.1	penicillin-binding protein 1A	-

Sequence

Protein

• Length: 171 a.a.
• Molecular weight: 19007.26 Da
• Isoelectric Point: 10.3600

>NTDB_id=1038694 ACBZ91_RS11245 WP_020334614.1 2404244..2404759(-) (pilP) [Vibrio natriegens strain JSH01]
MKNKSLLMVLMGMLLVGCQANDESLTDFIRDVENQARRDVEKLKPSDQYVAVAYAPQIMRAPFELPREATIATQPIARKD
CWQPPSRTRTGKLEKVPLSQLRLKGVMGIGSTVSGLVQAPNGTVYKVAPGQYLGRNNGKVTKITHSYLLIDETLPDGLGC
WQKRKVKLALR

Nucleotide

• Length: 516 bp

>NTDB_id=1038694 ACBZ91_RS11245 WP_020334614.1 2404244..2404759(-) (pilP) [Vibrio natriegens strain JSH01]
ATGAAAAATAAATCTTTGCTGATGGTTCTGATGGGAATGTTGCTGGTGGGGTGTCAGGCAAATGATGAGTCGTTAACGGA
CTTTATTCGTGACGTTGAAAATCAGGCGAGGCGGGATGTTGAGAAGCTCAAACCATCGGACCAATATGTCGCGGTTGCCT
ACGCACCGCAAATAATGAGAGCGCCTTTTGAATTACCCCGAGAGGCGACGATAGCGACTCAACCTATTGCGAGAAAAGAC
TGCTGGCAGCCGCCATCCAGAACTCGTACTGGCAAGTTAGAAAAAGTTCCGTTAAGTCAGCTAAGGCTGAAAGGCGTTAT
GGGGATAGGCAGCACAGTATCCGGGCTTGTGCAGGCTCCGAATGGAACGGTTTACAAAGTCGCTCCCGGTCAGTATCTCG
GACGTAACAACGGTAAGGTCACCAAAATTACCCATTCTTACTTACTGATCGACGAAACGCTGCCTGATGGTTTGGGTTGC
TGGCAGAAACGCAAAGTAAAGCTGGCTTTGAGATAG

Domains

Predicted by InterproScan.

• Pilus assembly protein, PilP (PilP) (25-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilP	Vibrio campbellii strain DS40M4	81.871	100	0.819
pilP	Vibrio cholerae strain A1552	55.814	100	0.561