Detailed information NTG1038482

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: KJP69_RS14190
• Genome accession: NZ_OX419550
• Coordinates: 2715522..2716127 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis isolate NRS6187
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2710522..2721127

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KJP69_RS14160 (NRS6187_14045)	-	2711335..2711724 (+)	390	WP_029727131.1	TIGR04086 family membrane protein	-
KJP69_RS14165 (NRS6187_14050)	yajC	2711781..2712047 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
KJP69_RS14170 (NRS6187_14055)	tgt	2712084..2713229 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
KJP69_RS14175 (NRS6187_14060)	queA	2713256..2714284 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
KJP69_RS14180 (NRS6187_14065)	yrzS	2714314..2714514 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
KJP69_RS14185 (NRS6187_14070)	ruvB	2714507..2715511 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
KJP69_RS14190 (NRS6187_14075)	ruvA	2715522..2716127 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
KJP69_RS14195 (NRS6187_14080)	bofC	2716266..2716778 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
KJP69_RS14200 (NRS6187_14085)	csbX	2716826..2718133 (-)	1308	WP_003246197.1	MFS transporter	-
KJP69_RS14205 (NRS6187_14090)	iolG	2718204..2719229 (-)	1026	WP_029727129.1	inositol 2-dehydrogenase	-
KJP69_RS14210 (NRS6187_14095)	yrzF	2719467..2720114 (+)	648	WP_003246159.1	phosphotransferase	-
KJP69_RS14215 (NRS6187_14100)	-	2720160..2720282 (-)	123	WP_003229707.1	hypothetical protein	-
KJP69_RS14220	-	2720367..2720441 (+)	75	Protein_2755	hypothetical protein	-
KJP69_RS14225 (NRS6187_14105)	-	2720445..2720813 (+)	369	WP_183163635.1	DUF5412 family protein	-
KJP69_RS14230	-	2720820..2720960 (+)	141	WP_029727127.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=1038482 KJP69_RS14190 WP_003229717.1 2715522..2716127(-) (ruvA) [Bacillus subtilis isolate NRS6187]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=1038482 KJP69_RS14190 WP_003229717.1 2715522..2716127(-) (ruvA) [Bacillus subtilis isolate NRS6187]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAGGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTACGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAGGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408