Detailed information NTG1038277

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: ACB088_RS02040
• Genome accession: NZ_CP167121
• Coordinates: 456931..459363 (+)
• Length: 810 a.a.
• NCBI ID: WP_375037866.1
• Uniprot ID: -
• Organism: Acinetobacter sp. RW6
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	456161..464046	456931..459363	within	0

Gene organization within MGE regions

Location: 456161..464046

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACB088_RS02035 (ACB088_02035)	lolD	456161..456847 (+)	687	WP_375037865.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACB088_RS02040 (ACB088_02040)	comA/comEC	456931..459363 (+)	2433	WP_375037866.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACB088_RS02045 (ACB088_02045)	-	459316..460299 (-)	984	WP_375037867.1	lysophospholipid acyltransferase family protein	-
ACB088_RS02050 (ACB088_02050)	sppA	460433..461449 (+)	1017	WP_005038834.1	signal peptide peptidase SppA	-
ACB088_RS02055 (ACB088_02055)	-	461471..462280 (+)	810	WP_375037868.1	alpha/beta fold hydrolase	-
ACB088_RS02060 (ACB088_02060)	purN	462350..462979 (-)	630	WP_092706577.1	phosphoribosylglycinamide formyltransferase	-
ACB088_RS02065 (ACB088_02065)	purM	462976..464046 (-)	1071	WP_004643711.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 810 a.a.
• Molecular weight: 92281.77 Da
• Isoelectric Point: 9.2426

>NTDB_id=1038277 ACB088_RS02040 WP_375037866.1 456931..459363(+) (comA/comEC) [Acinetobacter sp. RW6]
MLKLILVGWVVGIAFMGIDLPLITQYGWAGKVLLFISFIFYIFKQYIVVNRPILKAVYCLVCGLSLFVIGHQYAQHALNE
RLQLREMQPESLNIVVYIDRISEEKDNKTQQLAQVLGRSSHVVNWLLYLKNENEKALIEGPKLQLGHYYRISGKTRPAHS
YAVSGAFDQEQWFIQRNIMSGFSVQHIEPLSSDEIYRLGYQSHLKQQQNFLTGQQLNIEKLRLKFRVMLKKAPLQNKGLL
LALLTGDESLLNEQIKNQFKQLGISHLLAISGPHVLIFAIMLSWGLHQLVRRYYPQLYLWQPKQILTMISLCFGVLIYTA
FVGFEIPALRTLLSVFLFAFLLLVKLPVKPFSLLVFSASLLLLFDPFSILSAGFWLSYGSCFILLRIYQTIVQTPNLSSI
SVLSRIILLSKTLIESQGKIFIALCPLMLIFFQQISWVAPLTNIIAVPLLGGIIVPLNIFAACVWLIFNSIGNALFQIND
ILLSIVLTCFSFLEKLSLPLQGFSLTPLALLCLSCAIIILFLPRGVLPKSWGLICCLPLIIPNKSSQQIQLNIIDVGQGQ
SIFLQYPEQTWLIDTGGSYDEKAFSIGQNVVIPYLRHKGIKQLDHVVLSHLDQDHSGAFPFIAQAFPIKQVISNELWAEK
VKEPFTYCHQGQKWQYPQLDIEILWPKENDLNLVPSNQNQYSCVVYIHLKQVKGYQNYLIMGDAGWEAEYQLIKEYPDLK
VDVLVLGHHGSKHSSAYDFLATLNPKLVVASAGFNNRYGHPSKEVLARIQALNIPFKTTIEQGTLSFVSRNHQMVLYTRR
FERTWLHRTL

Nucleotide

• Length: 2433 bp

>NTDB_id=1038277 ACB088_RS02040 WP_375037866.1 456931..459363(+) (comA/comEC) [Acinetobacter sp. RW6]
ATGTTAAAGCTTATTTTAGTGGGGTGGGTTGTAGGTATTGCATTTATGGGAATAGATCTTCCCCTAATAACGCAATATGG
TTGGGCTGGTAAAGTTCTCCTCTTTATCAGCTTTATTTTTTATATTTTTAAGCAGTATATCGTTGTAAATCGACCTATAT
TAAAAGCAGTTTACTGTTTAGTTTGTGGTCTAAGCCTTTTTGTTATAGGTCATCAATATGCTCAGCATGCTTTAAATGAA
AGACTACAACTACGGGAGATGCAACCTGAGTCTTTAAACATTGTTGTGTATATAGATCGAATAAGTGAAGAAAAAGATAA
TAAGACACAGCAACTCGCTCAGGTTCTAGGGCGGTCATCCCATGTAGTCAATTGGCTATTATATTTAAAAAATGAAAATG
AGAAGGCATTGATAGAGGGTCCAAAATTACAATTAGGCCACTACTATCGGATTTCGGGTAAAACCAGACCTGCCCATAGT
TACGCAGTATCAGGTGCTTTTGATCAGGAACAATGGTTCATTCAACGAAATATAATGTCAGGTTTCAGTGTTCAGCATAT
TGAACCTTTAAGCTCTGATGAAATTTATCGGTTGGGTTATCAAAGTCACTTAAAACAGCAACAAAATTTTTTGACTGGAC
AACAATTAAATATAGAAAAACTACGCCTAAAATTTAGAGTGATGCTAAAAAAAGCTCCCTTACAGAACAAAGGACTGTTA
TTAGCACTTCTAACAGGAGATGAAAGCCTGTTAAATGAACAGATTAAAAATCAATTTAAGCAGTTAGGAATCTCTCATTT
GTTGGCCATTTCAGGGCCTCATGTCCTTATTTTTGCAATCATGTTGTCTTGGGGATTACATCAATTAGTACGACGTTATT
ATCCTCAGCTTTATTTGTGGCAACCCAAGCAAATATTGACAATGATTTCGTTATGTTTTGGAGTTTTGATTTATACGGCT
TTTGTAGGCTTTGAAATTCCAGCCTTAAGAACTTTACTTTCAGTATTTTTATTCGCCTTTTTATTGTTGGTAAAACTACC
TGTTAAGCCATTTTCGCTCTTGGTTTTCAGTGCAAGTCTACTTTTACTTTTCGACCCATTTAGTATCTTATCGGCAGGTT
TTTGGCTCTCTTATGGTTCTTGTTTTATTTTATTACGCATTTATCAAACTATAGTACAGACTCCAAATCTTTCTTCAATT
AGTGTGTTATCTAGAATAATTCTTTTAAGTAAAACCCTCATTGAATCTCAGGGAAAAATATTTATCGCCCTATGTCCTTT
AATGCTGATTTTCTTTCAACAAATTTCATGGGTTGCACCTCTCACAAATATTATTGCAGTTCCTTTGCTAGGAGGAATTA
TTGTTCCTTTGAATATTTTTGCTGCTTGTGTGTGGCTTATTTTTAATTCAATTGGAAATGCACTCTTTCAGATTAATGAT
ATTTTGCTCAGTATAGTGCTGACATGTTTTAGTTTTTTAGAGAAGTTATCTCTACCGTTGCAAGGTTTTAGCCTGACACC
ACTTGCTTTGTTATGTCTGAGCTGTGCCATTATTATCTTATTTTTACCACGTGGTGTTTTACCGAAATCTTGGGGTCTCA
TATGTTGTTTACCATTAATCATTCCAAATAAGTCATCCCAGCAAATTCAATTAAATATTATAGATGTAGGCCAAGGCCAA
TCTATTTTTTTACAATATCCAGAGCAGACATGGTTAATTGATACTGGCGGTTCTTATGATGAGAAGGCTTTTAGTATTGG
CCAAAATGTAGTGATTCCATATTTACGTCACAAAGGTATTAAACAATTAGATCATGTCGTGTTATCTCATCTTGACCAAG
ATCATAGTGGTGCATTTCCTTTTATCGCTCAGGCTTTTCCTATCAAACAAGTCATATCAAATGAGCTATGGGCAGAGAAG
GTGAAAGAACCATTTACCTATTGTCATCAAGGGCAAAAATGGCAATATCCCCAGTTAGATATTGAAATACTTTGGCCTAA
AGAAAATGATTTAAATTTAGTTCCTTCTAATCAAAATCAATATTCTTGTGTCGTTTATATTCATTTAAAACAAGTAAAGG
GTTATCAAAATTATTTAATTATGGGGGATGCTGGATGGGAAGCAGAATATCAATTGATAAAAGAATATCCTGATTTAAAG
GTAGATGTTTTGGTATTAGGTCATCATGGTAGTAAACATAGTTCTGCCTATGACTTCTTAGCGACTTTAAATCCCAAGCT
TGTTGTTGCCTCTGCCGGTTTTAATAACCGATACGGTCATCCAAGCAAAGAGGTTTTAGCCAGAATACAAGCACTTAATA
TTCCTTTTAAAACCACAATCGAGCAAGGAACATTAAGTTTTGTATCTCGTAATCATCAAATGGTTTTATACACTCGACGT
TTTGAGCGGACTTGGCTTCACAGAACTTTGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (243-522)

• Metallo-beta-lactamase superfamily (Lactamase_B) (555-640)

• Domain of unknown function (DUF4131) (DUF4131) (32-188)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	70.297	99.753	0.701
comA/comEC	Acinetobacter baumannii strain A118	69.554	99.753	0.694
comA/comEC	Acinetobacter baylyi ADP1	48.894	100	0.491