Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACB088_RS00845 Genome accession   NZ_CP167121
Coordinates   170027..170410 (+) Length   127 a.a.
NCBI ID   WP_042897425.1    Uniprot ID   A0A446ZGB5
Organism   Acinetobacter sp. RW6     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 165027..175410
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB088_RS00835 (ACB088_00835) - 167925..169034 (-) 1110 WP_375038751.1 efflux RND transporter periplasmic adaptor subunit -
  ACB088_RS00840 (ACB088_00840) - 169103..169741 (-) 639 WP_199990746.1 hypothetical protein -
  ACB088_RS00845 (ACB088_00845) pilG 170027..170410 (+) 384 WP_042897425.1 twitching motility response regulator PilG Regulator
  ACB088_RS00850 (ACB088_00850) - 170434..170796 (+) 363 WP_005036319.1 PleD family two-component system response regulator -
  ACB088_RS00855 (ACB088_00855) - 170856..171392 (+) 537 WP_005309806.1 chemotaxis protein CheW -
  ACB088_RS00860 (ACB088_00860) - 171435..173516 (+) 2082 WP_375037754.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14214.26 Da        Isoelectric Point: 4.5762

>NTDB_id=1038275 ACB088_RS00845 WP_042897425.1 170027..170410(+) (pilG) [Acinetobacter sp. RW6]
MEDAFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIIFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=1038275 ACB088_RS00845 WP_042897425.1 170027..170410(+) (pilG) [Acinetobacter sp. RW6]
ATGGAAGATGCATTCCAAAATCTGAAAGTAATGGTAATTGATGACTCAAAAACCATTCGCCGTACAGCCGAAACTTTATT
ACAGCGAGAAGGCTGTGAAGTGATTACTGCGGTGGATGGATTTGAAGCTTTGTCCAAAATTGCAGAAGCAAATCCAGATA
TTATTTTTGTCGATATCATGATGCCTCGTTTAGATGGTTATCAAACTTGCGCTTTGATTAAAAACTCTCAAAATTATCAG
AACATTCCCGTTATCATGCTCTCTAGTAAAGATGGTTTATTTGATCAGGCAAAAGGGCGTGTGGTAGGTTCAGATGAATA
CTTGACGAAACCTTTTAGCAAAGATGAATTGTTAAACGCGATTCGTAATCACGTAAGTTCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A446ZGB5

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

99.213

100

0.992
  vicR Streptococcus mutans UA159

43.59

92.126

0.402
  pilH Synechocystis sp. PCC 6803

40.708

88.976

0.362

Multiple sequence alignment