Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   ACB339_RS02150 Genome accession   NZ_CP167023
Coordinates   400276..401277 (+) Length   333 a.a.
NCBI ID   WP_371485273.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain Isolate 3     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 395276..406277
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACB339_RS02125 (ACB339_02125) - 395950..396633 (-) 684 WP_011017476.1 DUF969 domain-containing protein -
  ACB339_RS02130 (ACB339_02130) - 396844..397770 (-) 927 WP_011106859.1 glycosyltransferase family 2 protein -
  ACB339_RS02135 (ACB339_02135) - 397915..398292 (-) 378 WP_002985686.1 VOC family protein -
  ACB339_RS02140 (ACB339_02140) - 398303..398968 (-) 666 WP_002985684.1 NAD(P)H-dependent oxidoreductase -
  ACB339_RS02145 (ACB339_02145) - 399017..400102 (-) 1086 WP_011054264.1 aminopeptidase P family protein -
  ACB339_RS02150 (ACB339_02150) ccpA 400276..401277 (+) 1002 WP_371485273.1 catabolite control protein A Regulator
  ACB339_RS02155 (ACB339_02155) - 401408..402406 (+) 999 WP_002985678.1 glycosyltransferase family 4 protein -
  ACB339_RS02160 (ACB339_02160) - 402408..403742 (+) 1335 WP_002985676.1 glycosyltransferase family 4 protein -
  ACB339_RS02165 (ACB339_02165) thrS 404164..406107 (+) 1944 WP_011054265.1 threonine--tRNA ligase -

Sequence


Protein


Download         Length: 333 a.a.        Molecular weight: 36757.84 Da        Isoelectric Point: 5.7283

>NTDB_id=1038016 ACB339_RS02150 WP_371485273.1 400276..401277(+) (ccpA) [Streptococcus pyogenes strain Isolate 3]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANSYFS
ILAKGIDDIAAMYKYNIVLASSDEDDDKEVNVVNTLFAKQVDGIIFMGHHLTEKIRAEFSRSRTPVVLAGTVDLDHQLPS
VNIDYRDAVSNVVDILAENHKCIAFVSGPLIDDINGKVRLAGYKEGLKHNKLDFKEGLVFEANYSYKEGFELAQRVINSG
ATAAYVAEDELAAGLLNGLFEAGKRVPEDFEIITSNDSPVVQYTRPNLSSISQPVYDLGAVSMRMLTKIMNKEELEEKEI
LLNHGIKKRGTTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=1038016 ACB339_RS02150 WP_371485273.1 400276..401277(+) (ccpA) [Streptococcus pyogenes strain Isolate 3]
ATGAATACAGATGATACCATTACAATTTATGATGTTGCCCGTGAAGCTGGTGTTTCAATGGCAACCGTTAGTCGTGTTGT
TAATGGCAATAAAAATGTTAAGGAAAATACACGTAAGAAAGTTTTAGAAGTTATTGATCGCCTTGACTATCGTCCCAATG
CTGTCGCACGTGGTCTCGCCAGCAAAAAGACAACAACCGTTGGCGTTGTGATTCCAAATATTGCAAATAGTTATTTTTCT
ATCTTAGCTAAGGGTATTGACGATATCGCCGCTATGTACAAATATAATATTGTGCTTGCCTCCAGTGATGAAGATGATGA
CAAGGAGGTTAATGTTGTCAATACCCTTTTTGCCAAGCAAGTGGATGGTATTATTTTTATGGGGCATCACTTGACAGAAA
AAATCCGGGCCGAATTTTCACGCTCTCGTACTCCAGTTGTTTTGGCAGGAACTGTAGATCTTGATCATCAATTACCAAGC
GTCAACATTGACTATAGAGATGCGGTGTCAAACGTTGTTGATATTTTAGCTGAAAATCATAAGTGTATCGCTTTTGTGTC
AGGACCACTCATTGATGATATCAATGGTAAAGTGCGCTTAGCAGGGTACAAAGAAGGGTTGAAGCACAATAAGCTTGACT
TCAAAGAAGGTCTTGTTTTTGAAGCGAACTATTCTTATAAAGAAGGATTTGAATTGGCGCAGCGCGTCATTAACTCAGGA
GCAACAGCGGCTTATGTGGCTGAAGATGAATTGGCAGCAGGCCTTTTAAACGGCTTGTTTGAAGCAGGTAAACGCGTACC
AGAGGACTTTGAAATCATCACCAGCAACGATTCACCAGTGGTTCAATACACTCGTCCCAATTTGAGTTCTATCAGTCAAC
CTGTTTATGACTTAGGTGCTGTTAGCATGCGGATGTTGACTAAAATCATGAACAAAGAAGAGTTGGAAGAAAAAGAAATT
CTTTTGAATCATGGTATTAAAAAACGTGGGACAACTAAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

78.078

100

0.781

  ccpA Streptococcus pneumoniae D39

75.375

100

0.754

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

55.891

99.399

0.556


Multiple sequence alignment