Detailed information NTG1037579

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: AD178_RS09570
• Genome accession: NZ_OX244288
• Coordinates: 1863003..1863914 (-)
• Length: 303 a.a.
• NCBI ID: WP_000904854.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain PT8105 isolate 2RLC4
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1858003..1868914

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AD178_RS09550 (SAMEA1463109_01929)	rsmA	1858757..1859629 (-)	873	WP_001216871.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
AD178_RS09555	-	1859760..1860068 (-)	309	Protein_1876	hypothetical protein	-
AD178_RS09560 (SAMEA1463109_01931)	-	1860061..1860702 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
AD178_RS09565 (SAMEA1463109_01932)	-	1860704..1862734 (-)	2031	WP_000825242.1	bacteriocin-associated integral membrane family protein	-
AD178_RS09570 (SAMEA1463109_01933)	comR	1863003..1863914 (-)	912	WP_000904854.1	XRE family transcriptional regulator	Regulator
AD178_RS09575 (SAMEA1463109_01934)	rnmV	1863986..1864546 (-)	561	WP_000660010.1	ribonuclease M5	-
AD178_RS09580 (SAMEA1463109_01935)	-	1864546..1865319 (-)	774	WP_000575634.1	TatD family hydrolase	-
AD178_RS09585 (SAMEA1463109_01936)	-	1865624..1866364 (-)	741	WP_219336773.1	DUF1542 domain-containing protein	-
AD178_RS09590 (SAMEA1463109_01937)	rpmH	1866552..1866686 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
AD178_RS09595 (SAMEA1463109_01938)	-	1867094..1868047 (+)	954	WP_001155341.1	IS30-like element ISSpn8 family transposase	-

Sequence

Protein

• Length: 303 a.a.
• Molecular weight: 35509.76 Da
• Isoelectric Point: 4.4509

>NTDB_id=1037579 AD178_RS09570 WP_000904854.1 1863003..1863914(-) (comR) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPSAYLELKYQI
LREPIYDKEEEYDKKEACLEEIEDLFYEQLPNEEKVWFEATRATIDVIRSGQPEYGETVLDDYFKTIYDKELFLINELEV
INLYFAIVLTKIKQGQNQIEEINRIHSFLVRLTNHVELIAPEYLFALSNTLFSGLACLDNLSSYDSLGAYIFSLNHIMEK
TQDFQKKPIILMLEWKLSLIINNDYVSAEQFYQKSKLFADIIENSYLVTMLEKQWQEDLKKYL

Nucleotide

• Length: 912 bp

>NTDB_id=1037579 AD178_RS09570 WP_000904854.1 1863003..1863914(-) (comR) [Streptococcus pneumoniae strain PT8105 isolate 2RLC4]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTTCTGCTTATTTAGAATTGAAATACCAGATT
TTACGTGAACCAATCTATGATAAAGAAGAGGAGTATGATAAGAAAGAAGCGTGTTTGGAAGAGATAGAGGATTTATTTTA
TGAGCAACTTCCTAATGAGGAGAAAGTATGGTTTGAAGCTACTAGAGCAACGATAGATGTTATTCGAAGCGGACAACCAG
AATACGGGGAAACCGTACTGGACGATTATTTTAAAACAATTTATGATAAGGAATTGTTTTTGATAAATGAATTAGAAGTT
ATCAACTTATATTTTGCTATAGTGCTTACAAAGATAAAACAAGGTCAAAATCAGATTGAAGAAATTAACAGAATTCATTC
GTTTTTAGTTCGTTTGACAAATCATGTAGAATTAATTGCACCAGAATATCTGTTTGCTTTAAGTAACACTTTGTTTTCGG
GTCTAGCCTGTTTGGATAATTTGTCGTCTTATGATTCACTAGGAGCTTATATCTTTAGCCTTAATCATATAATGGAAAAA
ACACAAGATTTCCAGAAGAAACCAATTATATTAATGTTGGAGTGGAAATTATCTCTAATAATAAACAATGATTATGTTTC
TGCCGAACAGTTCTATCAGAAATCGAAGCTATTTGCTGATATAATAGAAAATTCTTATTTAGTTACTATGTTAGAAAAAC
AATGGCAAGAAGATTTAAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-295)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	38.851	97.69	0.38
comR	Streptococcus pyogenes MGAS8232	37.5	100	0.376
comR	Streptococcus suis P1/7	37.288	97.36	0.363
comR	Streptococcus suis 05ZYH33	37.288	97.36	0.363