Detailed information NTG1036488

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: ACA097_RS22870
• Genome accession: NZ_CP166971
• Coordinates: 4915476..4917695 (+)
• Length: 739 a.a.
• NCBI ID: WP_371366203.1
• Uniprot ID: -
• Organism: Pseudomonas sp. QL9
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4910476..4922695

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA097_RS22840 (ACA097_22830)	-	4910570..4910878 (-)	309	WP_371366198.1	phosphodiesterase	-
ACA097_RS22845 (ACA097_22835)	-	4910899..4911477 (-)	579	WP_043253463.1	PilZ domain-containing protein	-
ACA097_RS22850 (ACA097_22840)	-	4911600..4912853 (+)	1254	WP_043253462.1	lipoprotein-releasing ABC transporter permease subunit	-
ACA097_RS22855 (ACA097_22845)	lolD	4912846..4913529 (+)	684	WP_043253461.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
ACA097_RS22860 (ACA097_22850)	-	4913534..4914784 (+)	1251	WP_043253460.1	lipoprotein-releasing ABC transporter permease subunit	-
ACA097_RS22865 (ACA097_22855)	-	4914821..4915351 (-)	531	WP_371366201.1	DUF2062 domain-containing protein	-
ACA097_RS22870 (ACA097_22860)	comA	4915476..4917695 (+)	2220	WP_371366203.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
ACA097_RS22875 (ACA097_22865)	exbB	4917768..4918403 (+)	636	WP_043253457.1	MotA/TolQ/ExbB proton channel family protein	Machinery gene
ACA097_RS22880 (ACA097_22870)	-	4918400..4918846 (+)	447	WP_043253456.1	biopolymer transporter ExbD	-
ACA097_RS22885 (ACA097_22875)	lpxK	4918846..4919844 (+)	999	WP_371366206.1	tetraacyldisaccharide 4'-kinase	-
ACA097_RS22890 (ACA097_22880)	-	4919889..4920074 (+)	186	WP_009621404.1	Trm112 family protein	-
ACA097_RS22895 (ACA097_22885)	kdsB	4920095..4920859 (+)	765	WP_371366209.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
ACA097_RS22900 (ACA097_22890)	-	4920859..4921323 (+)	465	WP_371366211.1	low molecular weight protein-tyrosine-phosphatase	-
ACA097_RS22905 (ACA097_22895)	murB	4921320..4922339 (+)	1020	WP_371366213.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 739 a.a.
• Molecular weight: 80202.28 Da
• Isoelectric Point: 9.1104

>NTDB_id=1036488 ACA097_RS22870 WP_371366203.1 4915476..4917695(+) (comA) [Pseudomonas sp. QL9]
MRTGMFSLAVGMLLLRLLPELPPTWLLLLMALLALPLLYTRCYPIALVLLGFAWACCNAHWALDQRLAPELDGRTLWLEG
RVVGLPATRGSTLRFDLEEVSARLPLPSRLRLSWYEGQPVQAGERWRFAVTLKRLHGLANGFGFDYEAWLTVDRIGATGS
IKAGERLQPATGPNAWREAWRTRLLTADASGRNAYLVALVLGDGSGLGAADWKVLQNTGTLHLMVISGSHISLLGGLLYG
LIAGLARIGFWPARLPWMPCACAAALAGAWGYGWVAGLEVPALRACVMLSLVLLWRLRFRRQGVWLPVLAALVLVLLIDP
LASLSPGFWLSFAAVAWLIFGFAGRLGRGRWWLTWVRAQWLMSLGLAPMLIALALPLSFTGALANLLAVPCVELLVVPLA
LLGSLFLVLPPVGDWLLWCAGAVLEGLMRVLEQLSLWSPAWSPMLPPAWAIAIAAAGAVLCLAPAGVPSRVLGLAMLLPM
LWPQPKAPEHGYAEVRVLDVGQGLSVLIRTQSQAWLYDAGPRRGDFDLGEVAVLPTLRGLGIDKLDVMLLSHADNDHAGG
AIAVSKGVSVAKVISGEPGRLPARLRAVPCEENEWLIDGVRFSTWQWPRADESNALSCVLRVEALGESLLLTGDLPVAGE
AAWLKAQPRPYADWLLAGHHGSRTSSGEAFLRALEPNSALVSRARHNSYGHPHPQVLARFASLGTRVHDTAEEGAMHILL
GARQPMRGVRANARFWTEK

Nucleotide

• Length: 2220 bp

>NTDB_id=1036488 ACA097_RS22870 WP_371366203.1 4915476..4917695(+) (comA) [Pseudomonas sp. QL9]
ATGCGTACAGGGATGTTCTCGCTTGCCGTCGGCATGTTGCTCCTGCGCCTGCTGCCCGAGTTGCCGCCGACCTGGCTGCT
GTTATTGATGGCGCTGCTCGCCCTGCCACTTCTATATACGCGCTGTTATCCCATCGCCCTGGTACTGCTGGGCTTCGCCT
GGGCCTGCTGCAACGCGCACTGGGCGCTGGATCAACGCCTGGCGCCAGAGCTGGATGGTCGTACCTTGTGGCTGGAAGGG
CGGGTGGTCGGCTTGCCAGCTACCCGCGGCTCGACCCTGCGTTTCGACCTGGAAGAGGTCAGTGCGCGCTTGCCGCTTCC
TTCGCGCCTGCGCCTTTCCTGGTACGAAGGCCAACCGGTGCAGGCGGGCGAGCGCTGGCGCTTCGCCGTTACCCTGAAGC
GTCTCCATGGCCTGGCCAACGGGTTTGGCTTCGACTACGAAGCCTGGCTGACCGTCGATCGGATAGGCGCGACCGGCAGC
ATCAAGGCCGGCGAGCGCCTGCAGCCGGCAACTGGCCCCAACGCCTGGCGCGAGGCTTGGCGGACGCGCCTGTTGACGGC
CGATGCCAGCGGCCGCAATGCGTACCTGGTGGCCTTGGTGCTAGGCGATGGGAGCGGGCTGGGCGCGGCGGACTGGAAGG
TCCTGCAGAACACCGGAACCCTGCATCTGATGGTGATATCTGGCTCGCATATCTCACTGCTTGGCGGCTTGCTCTATGGC
CTGATCGCTGGCCTGGCGCGAATCGGGTTCTGGCCTGCGCGACTGCCTTGGATGCCGTGCGCTTGCGCGGCAGCTTTGGC
CGGAGCCTGGGGTTATGGTTGGGTCGCCGGACTCGAAGTCCCGGCCTTGCGCGCCTGCGTGATGCTCAGCCTGGTGTTGC
TCTGGCGCCTGCGCTTTCGCCGTCAGGGCGTATGGCTGCCGGTGTTGGCGGCGCTGGTGCTGGTATTGCTGATCGATCCC
CTGGCCAGCCTGAGCCCGGGCTTCTGGCTGTCGTTCGCCGCCGTGGCCTGGCTGATCTTCGGCTTCGCCGGCCGCCTGGG
TCGTGGGCGCTGGTGGCTGACCTGGGTGCGGGCGCAATGGCTGATGAGCCTGGGACTGGCGCCGATGCTTATCGCGCTGG
CGCTGCCGCTGAGTTTCACCGGCGCCCTGGCCAACCTTCTGGCGGTGCCTTGCGTGGAACTGCTAGTGGTGCCGCTGGCC
TTGCTGGGCAGCCTGTTCCTGGTGCTGCCGCCGGTGGGCGATTGGCTGTTGTGGTGCGCCGGTGCCGTACTCGAAGGGTT
GATGCGTGTGCTCGAACAGCTTTCCCTATGGTCTCCAGCCTGGAGTCCGATGCTTCCGCCGGCCTGGGCCATTGCAATAG
CCGCTGCGGGCGCCGTGTTATGTCTGGCGCCAGCTGGGGTGCCGTCGAGAGTGCTGGGGCTGGCAATGTTGCTGCCGATG
CTCTGGCCTCAGCCGAAGGCGCCAGAGCACGGGTACGCCGAGGTTCGGGTGCTCGACGTGGGGCAGGGGCTCTCGGTACT
GATCCGCACGCAGAGTCAGGCCTGGCTCTATGACGCAGGACCGCGGCGGGGCGATTTCGACCTCGGGGAGGTCGCGGTAT
TGCCGACCCTGCGGGGACTGGGCATCGACAAGCTGGACGTCATGCTGCTCAGTCACGCCGACAACGATCATGCCGGCGGC
GCTATTGCCGTCAGCAAGGGTGTTTCGGTGGCCAAGGTGATCAGCGGCGAGCCTGGGCGCTTGCCCGCGCGCTTGCGCGC
AGTGCCCTGCGAAGAGAACGAATGGCTGATCGACGGCGTGCGCTTTTCCACCTGGCAGTGGCCGCGCGCCGATGAAAGCA
ACGCGCTGTCTTGTGTCCTGCGGGTCGAGGCCCTTGGCGAAAGCCTGCTGCTGACTGGCGACCTGCCTGTAGCCGGGGAG
GCTGCTTGGCTAAAGGCTCAGCCGCGCCCTTATGCCGACTGGCTACTCGCTGGCCATCATGGCAGCCGCACTTCGTCCGG
AGAGGCGTTCCTGCGTGCGCTCGAACCGAATTCGGCGCTGGTGTCCCGGGCTCGGCACAACTCCTATGGCCATCCCCATC
CGCAGGTTCTGGCGCGTTTTGCGAGTCTCGGCACACGCGTTCATGACACGGCGGAGGAGGGTGCCATGCACATCTTGCTC
GGGGCCCGCCAGCCGATGCGCGGAGTGCGCGCAAACGCACGCTTCTGGACGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-166)

• Competence protein (Competence) (199-462)

• Metallo-beta-lactamase superfamily (Lactamase_B) (499-681)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	56.084	96.752	0.543
comA	Ralstonia pseudosolanacearum GMI1000	35.504	100	0.391