Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   ACA097_RS10530 Genome accession   NZ_CP166971
Coordinates   2217385..2217792 (-) Length   135 a.a.
NCBI ID   WP_009615249.1    Uniprot ID   A0A024H9X0
Organism   Pseudomonas sp. QL9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2212385..2222792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACA097_RS10510 (ACA097_10505) - 2213345..2214202 (-) 858 WP_043248641.1 protein-glutamate O-methyltransferase -
  ACA097_RS10515 (ACA097_10510) - 2214263..2216308 (-) 2046 WP_043248639.1 methyl-accepting chemotaxis protein -
  ACA097_RS10520 (ACA097_10515) - 2216391..2216927 (-) 537 WP_043248637.1 chemotaxis protein CheW -
  ACA097_RS10525 (ACA097_10520) pilH 2216975..2217340 (-) 366 WP_043248635.1 twitching motility response regulator PilH -
  ACA097_RS10530 (ACA097_10525) pilG 2217385..2217792 (-) 408 WP_009615249.1 twitching motility response regulator PilG Regulator
  ACA097_RS10535 (ACA097_10530) gshB 2218037..2219008 (+) 972 WP_043248632.1 glutathione synthase -
  ACA097_RS10540 (ACA097_10535) - 2219093..2219986 (+) 894 WP_043248631.1 energy transducer TonB -
  ACA097_RS10545 (ACA097_10540) - 2220058..2220624 (+) 567 WP_043248630.1 YqgE/AlgH family protein -
  ACA097_RS10550 (ACA097_10545) ruvX 2220624..2221052 (+) 429 WP_371370085.1 Holliday junction resolvase RuvX -
  ACA097_RS10555 (ACA097_10550) pyrR 2221167..2221676 (+) 510 WP_043248627.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  ACA097_RS10560 (ACA097_10555) - 2221718..2222722 (+) 1005 WP_043248624.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14828.19 Da        Isoelectric Point: 6.7119

>NTDB_id=1036470 ACA097_RS10530 WP_009615249.1 2217385..2217792(-) (pilG) [Pseudomonas sp. QL9]
MEQHSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKTHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1036470 ACA097_RS10530 WP_009615249.1 2217385..2217792(-) (pilG) [Pseudomonas sp. QL9]
ATGGAACAGCATTCCGATGGTTTGAAGGTAATGGTGATCGACGATTCCAAAACGATTCGTCGCACCGCGGAAACCTTGCT
GAAGAAAGTCGGCTGTGACGTCATCACGGCGATCGACGGCTTCGACGCTCTGGCGAAGATTGCCGATACCCATCCCAACA
TCATCTTTGTCGACATCATGATGCCGCGACTCGACGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCCTTCAAA
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGTCGAATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCTTTCAGCAAGGAAGAGCTGCTCGGCGCCATCAAGACCCATGTGCCCGACTTCACCCCGGTGGAGCAAG
CTTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A024H9X0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

75.2

92.593

0.696
  vicR Streptococcus mutans UA159

42.063

93.333

0.393

Multiple sequence alignment