Detailed information NTG1035786

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: ABKQ09_RS17640
• Genome accession: NZ_CP166870
• Coordinates: 3509797..3510960 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain F4
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3504797..3515960

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABKQ09_RS17610 (ABKQ09_17605)	-	3505048..3505467 (-)	420	WP_003326721.1	TIGR03826 family flagellar region protein	-
ABKQ09_RS17615 (ABKQ09_17610)	comFC	3505539..3506261 (-)	723	WP_155723718.1	double zinc ribbon domain-containing protein	Machinery gene
ABKQ09_RS17620 (ABKQ09_17615)	-	3506225..3506521 (-)	297	WP_003326719.1	late competence development ComFB family protein	-
ABKQ09_RS17625 (ABKQ09_17620)	comFA	3506578..3507975 (-)	1398	WP_061669174.1	ATP-dependent helicase ComFA	Machinery gene
ABKQ09_RS17630 (ABKQ09_17625)	-	3508082..3508924 (-)	843	WP_268513897.1	DegV family protein	-
ABKQ09_RS17635 (ABKQ09_17630)	degU	3509031..3509720 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
ABKQ09_RS17640 (ABKQ09_17635)	degS	3509797..3510960 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
ABKQ09_RS17645 (ABKQ09_17640)	-	3511178..3511831 (+)	654	WP_003326713.1	YigZ family protein	-
ABKQ09_RS17650 (ABKQ09_17645)	-	3511831..3513087 (+)	1257	WP_106360079.1	LCP family protein	-
ABKQ09_RS17655 (ABKQ09_17650)	-	3513178..3514254 (-)	1077	WP_003326711.1	MraY family glycosyltransferase	-
ABKQ09_RS17660 (ABKQ09_17655)	-	3514394..3515584 (-)	1191	WP_371176123.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=1035786 ABKQ09_RS17640 WP_003326714.1 3509797..3510960(-) (degS) [Bacillus atrophaeus strain F4]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=1035786 ABKQ09_RS17640 WP_003326714.1 3509797..3510960(-) (degS) [Bacillus atrophaeus strain F4]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATCGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGTAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAAGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCTGAATTAATCGAACGAATCTTTCGCGACCGGG
GGACTGAAGACGGTTTTCAGGAAATTAAAAATCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGTTGAGAAAATATCTTTATACAACCGAGGAGTA
CAACGGAAAGGTCAAAATACATTTTCAGTGCATCGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGATTTGCTTGAGGGGACTATTACGATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959