Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   AB3239_RS16745 Genome accession   NZ_CP166831
Coordinates   3198424..3200733 (-) Length   769 a.a.
NCBI ID   WP_038828679.1    Uniprot ID   A0A8I2B7I9
Organism   Bacillus subtilis strain TE3T-UV25     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3193424..3205733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3239_RS16705 (AB3239_16705) mrpB 3193891..3194322 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  AB3239_RS16710 (AB3239_16710) mrpC 3194322..3194663 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  AB3239_RS16715 (AB3239_16715) mrpD 3194656..3196137 (+) 1482 WP_021480494.1 Na+/H+ antiporter subunit D -
  AB3239_RS16720 (AB3239_16720) mrpE 3196143..3196619 (+) 477 WP_021480495.1 Na+/H+ antiporter subunit E -
  AB3239_RS16725 (AB3239_16725) mrpF 3196619..3196903 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  AB3239_RS16730 (AB3239_16730) mnhG 3196887..3197261 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  AB3239_RS16735 (AB3239_16735) yuxO 3197300..3197680 (-) 381 WP_014477831.1 hotdog fold thioesterase -
  AB3239_RS16740 (AB3239_16740) comA 3197699..3198343 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  AB3239_RS16745 (AB3239_16745) comP 3198424..3200733 (-) 2310 WP_038828679.1 two-component system sensor histidine kinase ComP Regulator
  AB3239_RS16750 (AB3239_16750) comX 3200748..3200915 (-) 168 WP_038828676.1 competence pheromone ComX Regulator
  AB3239_RS16755 (AB3239_16755) comQ 3200903..3201802 (-) 900 WP_038828674.1 class 1 isoprenoid biosynthesis enzyme Regulator
  AB3239_RS16760 (AB3239_16760) degQ 3201987..3202127 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  AB3239_RS16765 (AB3239_16765) - 3202349..3202411 (+) 63 Protein_3237 hypothetical protein -
  AB3239_RS16770 (AB3239_16770) - 3202589..3202957 (+) 369 WP_038828672.1 hypothetical protein -
  AB3239_RS16775 (AB3239_16775) pdeH 3202933..3204162 (-) 1230 WP_003243525.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89343.83 Da        Isoelectric Point: 8.2641

>NTDB_id=1035553 AB3239_RS16745 WP_038828679.1 3198424..3200733(-) (comP) [Bacillus subtilis strain TE3T-UV25]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKVQKNDKSQFVIEEISKSSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRSYSFFLFVLPLVFYFLSIICIFYIFKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQTYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATVN
LVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMEIQMNPLRQTVFFFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKKTILDVLHVSKAYTFEVTPDHKVIFLDKHEIEPEWHLYKEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVLHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=1035553 AB3239_RS16745 WP_038828679.1 3198424..3200733(-) (comP) [Bacillus subtilis strain TE3T-UV25]
TTGAAGAACTTGATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATTAG
TATGAATGGGATTATTATTGGGACTAAGGTTCAAAAAAATGATAAAAGTCAATTTGTAATAGAAGAAATATCAAAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGATATCATATTAAAAATCAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTTGGATATTTTAAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGATCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTACTTTTTAAGCATAATATGCATTT
TTTATATATTTAAGGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGTGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAACATACCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCAATTTTGACTCTATTTTCTTTTTCAGCGATATATTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTTTATCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTTGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTTGCCATGATACCAAC
TCTTCTTATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGAAATACAGATGAATCCTTTACGCCAAACGGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTC
AACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGAGGTGTAACTTCTCTTCAACAAGTCTTTAAAGAACTGAA
AAAAACTATTTTGGATGTTTTACATGTAAGCAAAGCTTATACCTTTGAGGTAACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATCGAACCGGAATGGCATCTTTATAAAGAGGAGTTTGAAAACGTAACATCAGAAATCGGGAAAATTATA
GAAGTCAATCAAGGCTTTCTTATGAAAGTTGGTGAACGAGGTGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCCCGGCTAACACGTGATGAAATATCGTGGCTGAAAACACTGTCTTTTTATACAAGTGTGTCCATGGAAAATGTTC
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAGCAAGAGGGAACCAACCCGATATGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGTGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
CAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTTA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

97.009

100

0.97


Multiple sequence alignment