Detailed information NTG1035347

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACA345_RS26335
• Genome accession: NZ_CP166819
• Coordinates: 5611869..5613206 (+)
• Length: 445 a.a.
• NCBI ID: WP_003110427.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain M6121663
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5606869..5618206

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA345_RS26310 (ACA345_26310)	pgeF	5607013..5607741 (-)	729	WP_033991129.1	peptidoglycan editing factor PgeF	-
ACA345_RS26315 (ACA345_26315)	rluD	5607738..5608700 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACA345_RS26320 (ACA345_26320)	-	5608845..5609870 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ACA345_RS26325 (ACA345_26325)	-	5610027..5610272 (+)	246	WP_009316269.1	PP0621 family protein	-
ACA345_RS26330 (ACA345_26330)	pilS	5610262..5611854 (+)	1593	WP_003110428.1	two-component system sensor histidine kinase PilS	Regulator
ACA345_RS26335 (ACA345_26335)	pilR	5611869..5613206 (+)	1338	WP_003110427.1	two-component system response regulator PilR	Regulator
ACA345_RS26340 (ACA345_26340)	thiO	5613252..5614346 (-)	1095	WP_033991130.1	glycine oxidase ThiO	-
ACA345_RS26345 (ACA345_26345)	-	5614486..5614986 (+)	501	WP_016562346.1	GspH/FimT family pseudopilin	-
ACA345_RS26350 (ACA345_26350)	-	5615109..5615597 (+)	489	WP_003141552.1	GspH/FimT family pseudopilin	-
ACA345_RS26355 (ACA345_26355)	pilV	5615607..5616131 (+)	525	WP_003116261.1	type IV pilus modification protein PilV	Machinery gene
ACA345_RS26360 (ACA345_26360)	-	5616140..5616955 (+)	816	WP_016254061.1	PilW family protein	-
ACA345_RS26365 (ACA345_26365)	-	5616952..5617557 (+)	606	WP_003116263.1	PilX N-terminal domain-containing pilus assembly protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49723.03 Da
• Isoelectric Point: 5.8638

>NTDB_id=1035347 ACA345_RS26335 WP_003110427.1 5611869..5613206(+) (pilR) [Pseudomonas aeruginosa strain M6121663]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLADRI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1035347 ACA345_RS26335 WP_003110427.1 5611869..5613206(+) (pilR) [Pseudomonas aeruginosa strain M6121663]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATCCACGAGCAGGGCCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCACCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGATCGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTATACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCGGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGATATCGAGCGCAAGCTGATCATGCAGGCACTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.775	100	0.998
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384