Detailed information NTG1035314

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: ACA342_RS26345
• Genome accession: NZ_CP166817
• Coordinates: 5614605..5615942 (+)
• Length: 445 a.a.
• NCBI ID: WP_003110427.1
• Uniprot ID: -
• Organism: Pseudomonas aeruginosa strain M7242404
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 5609605..5620942

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACA342_RS26320 (ACA342_26320)	pgeF	5609749..5610477 (-)	729	WP_033991129.1	peptidoglycan editing factor PgeF	-
ACA342_RS26325 (ACA342_26325)	rluD	5610474..5611436 (-)	963	WP_003094686.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
ACA342_RS26330 (ACA342_26330)	-	5611581..5612606 (+)	1026	WP_003102590.1	outer membrane protein assembly factor BamD	-
ACA342_RS26335 (ACA342_26335)	-	5612763..5613008 (+)	246	WP_009316269.1	PP0621 family protein	-
ACA342_RS26340 (ACA342_26340)	pilS	5612998..5614590 (+)	1593	WP_003110428.1	two-component system sensor histidine kinase PilS	Regulator
ACA342_RS26345 (ACA342_26345)	pilR	5614605..5615942 (+)	1338	WP_003110427.1	two-component system response regulator PilR	Regulator
ACA342_RS26350 (ACA342_26350)	thiO	5615988..5617082 (-)	1095	WP_033991130.1	glycine oxidase ThiO	-
ACA342_RS26355 (ACA342_26355)	-	5617222..5617722 (+)	501	WP_016562346.1	GspH/FimT family pseudopilin	-
ACA342_RS26360 (ACA342_26360)	-	5617845..5618333 (+)	489	WP_003141552.1	GspH/FimT family pseudopilin	-
ACA342_RS26365 (ACA342_26365)	pilV	5618343..5618867 (+)	525	WP_003116261.1	type IV pilus modification protein PilV	Machinery gene
ACA342_RS26370 (ACA342_26370)	-	5618876..5619691 (+)	816	WP_016254061.1	PilW family protein	-
ACA342_RS26375 (ACA342_26375)	-	5619688..5620293 (+)	606	WP_003116263.1	PilX N-terminal domain-containing pilus assembly protein	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49723.03 Da
• Isoelectric Point: 5.8638

>NTDB_id=1035314 ACA342_RS26345 WP_003110427.1 5614605..5615942(+) (pilR) [Pseudomonas aeruginosa strain M7242404]
MSRQKALIVDDEPDIRELLEITLGRMKLDTRSARNVKEARELLAREPFDLCLTDMRLPDGSGLDLVQYIQQRHPQTPVAM
ITAYGSLDTAIQALKAGAFDFLTKPVDLGRLRELVATALRLRNPEAEEAPVDNRLLGESPPMRALRNQIGKLARSQAPVY
ISGESGSGKELVARLIHEQGPRIERPFVPVNCGAIPSELMESEFFGHKKGSFTGAIEDKQGLFQAASGGTLFLDEVADLP
MAMQVKLLRAIQEKAVRAVGGQQEVAVDVRILCATHKDLAAEVGAGRFRQDLYYRLNVIELRVPPLRERREDIPLLADRI
LKRLAGDTGLPAARLTGDAQEKLKNYRFPGNVRELENMLERAYTLCEDDQIQPHDLRLADAPGASQEGAASLSEIDNLED
YLEDIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGID

Nucleotide

• Length: 1338 bp

>NTDB_id=1035314 ACA342_RS26345 WP_003110427.1 5614605..5615942(+) (pilR) [Pseudomonas aeruginosa strain M7242404]
ATGAGCCGACAAAAAGCCCTGATCGTCGACGATGAACCGGATATCCGCGAACTGCTGGAAATCACTCTCGGCCGCATGAA
GCTGGACACCCGCAGCGCCCGCAACGTCAAGGAAGCCCGCGAGTTGCTGGCCCGCGAGCCGTTCGACCTGTGCCTCACCG
ACATGCGCCTGCCGGACGGCAGCGGCCTCGATCTGGTCCAGTACATCCAGCAGCGCCATCCACAGACCCCGGTGGCCATG
ATCACCGCGTACGGCAGCCTGGACACCGCGATCCAGGCGCTCAAGGCCGGTGCCTTCGACTTCCTCACCAAACCGGTCGA
CCTCGGTCGCTTGCGGGAGCTGGTGGCAACCGCCCTGCGCTTGCGCAACCCGGAAGCCGAGGAAGCGCCGGTGGACAACC
GCCTGCTCGGCGAGTCGCCGCCGATGCGCGCCCTGCGCAACCAGATCGGCAAGCTGGCGCGCAGCCAGGCGCCGGTCTAC
ATCAGTGGCGAGTCCGGCAGCGGCAAGGAACTGGTGGCGCGCCTGATCCACGAGCAGGGCCCACGTATCGAGCGGCCGTT
CGTGCCGGTGAACTGCGGCGCGATTCCCTCCGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCACTG
GCGCTATCGAAGACAAGCAGGGCCTGTTCCAGGCCGCCAGCGGCGGCACCCTGTTCCTCGACGAAGTCGCCGACCTGCCG
ATGGCCATGCAGGTCAAACTGCTCCGGGCGATCCAGGAAAAGGCCGTGCGCGCGGTCGGCGGCCAGCAGGAGGTCGCCGT
CGACGTGCGCATCCTCTGCGCCACCCACAAGGACCTCGCCGCCGAAGTCGGCGCCGGGCGCTTCCGCCAGGACCTCTACT
ACCGCCTCAACGTCATCGAGCTGCGCGTACCACCGCTGCGCGAACGCCGCGAGGACATCCCGCTGCTCGCCGATCGCATC
CTCAAGCGCCTGGCCGGCGACACCGGCCTGCCGGCCGCCAGGCTGACCGGCGACGCACAGGAGAAGCTGAAGAACTACCG
CTTCCCGGGCAACGTCCGCGAGCTGGAAAACATGCTGGAGCGCGCCTATACCCTGTGCGAAGACGACCAGATCCAGCCTC
ACGACCTGCGCCTGGCCGATGCGCCGGGTGCCAGCCAGGAAGGCGCGGCGAGCCTGAGCGAAATCGACAACCTCGAGGAC
TACCTGGAAGATATCGAGCGCAAGCTGATCATGCAGGCACTCGAGGAGACCCGCTGGAACCGCACCGCCGCGGCCCAGCG
CCTGGGCCTGACGTTCCGCTCGATGCGCTACCGCCTGAAAAAGCTGGGCATCGACTGA

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Response regulator receiver domain (Response_reg) (7-115)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	99.775	100	0.998
pilR	Acinetobacter baumannii strain A118	51.198	100	0.528
luxO	Vibrio cholerae strain A1552	38.17	100	0.384