Detailed information NTG1034700

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: AB6911_RS18510
• Genome accession: NZ_CP166481
• Coordinates: 3609781..3610944 (-)
• Length: 387 a.a.
• NCBI ID: WP_003326714.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain globigii
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3604781..3615944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6911_RS18480 (AB6911_18450)	-	3605032..3605451 (-)	420	WP_003326721.1	TIGR03826 family flagellar region protein	-
AB6911_RS18485 (AB6911_18455)	comFC	3605523..3606245 (-)	723	WP_034717733.1	amidophosphoribosyltransferase	Machinery gene
AB6911_RS18490 (AB6911_18460)	-	3606209..3606505 (-)	297	WP_003326719.1	late competence development ComFB family protein	-
AB6911_RS18495 (AB6911_18465)	comFA	3606562..3607959 (-)	1398	WP_003326717.1	ATP-dependent helicase ComFA	Machinery gene
AB6911_RS18500 (AB6911_18470)	-	3608066..3608908 (-)	843	WP_003326716.1	DegV family protein	-
AB6911_RS18505 (AB6911_18475)	degU	3609015..3609704 (-)	690	WP_003326715.1	two-component system response regulator DegU	Regulator
AB6911_RS18510 (AB6911_18480)	degS	3609781..3610944 (-)	1164	WP_003326714.1	two-component sensor histidine kinase DegS	Regulator
AB6911_RS18515 (AB6911_18485)	-	3611162..3611815 (+)	654	WP_003326713.1	YigZ family protein	-
AB6911_RS18520 (AB6911_18490)	-	3611815..3613071 (+)	1257	WP_003326712.1	LCP family protein	-
AB6911_RS18525 (AB6911_18495)	-	3613161..3614237 (-)	1077	WP_003326711.1	MraY family glycosyltransferase	-
AB6911_RS18530 (AB6911_18500)	-	3614378..3615568 (-)	1191	WP_087941797.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45165.02 Da
• Isoelectric Point: 7.1378

>NTDB_id=1034700 AB6911_RS18510 WP_003326714.1 3609781..3610944(-) (degS) [Bacillus atrophaeus strain globigii]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIDLGDKLEVHTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTEDKRIAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TKDFVILMIKDNGKGFDVKDTKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLTL

Nucleotide

• Length: 1164 bp

>NTDB_id=1034700 AB6911_RS18510 WP_003326714.1 3609781..3610944(-) (degS) [Bacillus atrophaeus strain globigii]
ATGAATAAAACAAAGATGGATTCCAAAGTGCTGGACTCTATTCTAATGAAGATGCTAAAGACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAGATTGGGGAACAGTCCCGCCAGCAGTATGAGCAGCTGGTTGAAGAATTGAAACAAATCAAACAGCAGG
TATATGAAGTGATTGACCTTGGTGATAAGCTAGAAGTGCATACCCGCCATGCCAGAAACCGTTTATCAGAGGTCAGCCGC
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCCTATGAAAAAGCACATAAACTTCAAGTCGAACTGACAATGAT
TCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGGGATGATTTAGAACGCAGGCTGTTAGGCCTTCAGGAAATTATTGAAC
GGTCAGAATCGTTAGTCAGCCAAATTACTGTGGTGTTAAACTATCTGAATCAGGATTTGCGGCAAGTCGGGTTGCTTCTT
GCAGACGCTCAGGCGAAACAGGATTTTGGATTGAGGATTATTGAAGCCCAAGAAGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTGATGATGAGATCTGAATTAATCGAACGAATCTTTCGCGACCGGG
GGACTGAAGACGGTTTTCAGGAAATTAAAAATCTGCGGCAAAATGTGCGAAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCTCTAGATGATTTGGGTCTGATCCCCACGCTGAGAAAATATCTTTATACAACCGAGGAGTA
CAACGGAAAGGTCAAAATACATTTTCAGTGCATCGGTGATACGGAAGACAAGCGAATTGCGCCACAGTTTGAAGTCGCGC
TCTTCAGGCTCGCACAGGAAGCAGTGACTAACGCGTTAAAGCATTCAGAATCAGAAGAAATAACAGTCAAAGTTGAGGTC
ACAAAAGATTTTGTTATCTTAATGATAAAGGATAACGGAAAAGGCTTTGATGTGAAGGATACTAAACAGAAAAAGAATAA
ATCATTTGGTTTGCTTGGGATGAAAGAGAGAGTAGATTTGCTTGAGGGGACTATTACGATAGACTCTAAAATAGGTCTTG
GGACATTCATCATGATAAAGGTTCCGTTATCTCTTACTCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	96.364	99.483	0.959