Detailed information NTG1034682

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: AB6911_RS13870
• Genome accession: NZ_CP166481
• Coordinates: 2707551..2708174 (-)
• Length: 207 a.a.
• NCBI ID: WP_003325391.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain globigii
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2702551..2713174

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6911_RS13840 (AB6911_13820)	rpsT	2702845..2703111 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
AB6911_RS13845 (AB6911_13825)	holA	2703126..2704169 (-)	1044	WP_003325395.1	DNA polymerase III subunit delta	-
AB6911_RS13850 (AB6911_13830)	-	2704209..2704358 (-)	150	WP_010789254.1	hypothetical protein	-
AB6911_RS13855 (AB6911_13835)	-	2704399..2704533 (+)	135	WP_003229983.1	YqzM family protein	-
AB6911_RS13860 (AB6911_13840)	comEC	2704574..2706907 (-)	2334	WP_003325393.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB6911_RS13865 (AB6911_13845)	-	2706914..2707483 (-)	570	WP_003325392.1	ComE operon protein 2	-
AB6911_RS13870 (AB6911_13850)	comEA	2707551..2708174 (-)	624	WP_003325391.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB6911_RS13875 (AB6911_13855)	comER	2708258..2709079 (+)	822	WP_003325389.1	late competence protein ComER	-
AB6911_RS13880 (AB6911_13860)	-	2709149..2709889 (-)	741	WP_003325388.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-
AB6911_RS13885 (AB6911_13865)	rsfS	2709886..2710242 (-)	357	WP_003325387.1	ribosome silencing factor	-
AB6911_RS13890 (AB6911_13870)	yqeK	2710259..2710819 (-)	561	WP_003325386.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB6911_RS13895 (AB6911_13875)	-	2710809..2711378 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
AB6911_RS13900 (AB6911_13880)	yhbY	2711390..2711680 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-
AB6911_RS13905 (AB6911_13885)	aroE	2711674..2712516 (-)	843	WP_003325383.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 207 a.a.
• Molecular weight: 22063.86 Da
• Isoelectric Point: 4.7220

>NTDB_id=1034682 AB6911_RS13870 WP_003325391.1 2707551..2708174(-) (comEA) [Bacillus atrophaeus strain globigii]
MNWFYQHKKIILTAGAAVIFIVILLNFPGAKKQEPVQQITASPETAGTRVQQQESKGDADGEKIIIDIKGAVKHPGVYEL
KTGDRVSQAIEKAGGINSEADEKQVNLAELLQDGTVVYIPSEGEEPTQSTTANASVQNGAGKEALVNINTASLEELQAIS
GVGPSKAEAIIAYREENGKFQAVEDITNVSGIGEKSFEKIKSAITVK

Nucleotide

• Length: 624 bp

>NTDB_id=1034682 AB6911_RS13870 WP_003325391.1 2707551..2708174(-) (comEA) [Bacillus atrophaeus strain globigii]
ATGAATTGGTTTTACCAGCACAAAAAAATAATCTTAACGGCAGGTGCTGCTGTCATCTTCATCGTCATCCTGCTTAATTT
TCCCGGCGCAAAGAAGCAGGAGCCTGTTCAGCAAATCACAGCGTCGCCTGAAACGGCGGGCACACGAGTTCAGCAGCAAG
AATCAAAAGGTGATGCTGACGGAGAAAAAATTATCATTGATATTAAAGGCGCTGTCAAACATCCGGGTGTCTACGAATTG
AAAACGGGAGACAGAGTTTCACAGGCTATCGAAAAAGCGGGAGGCATTAATTCGGAGGCTGATGAAAAACAAGTAAATTT
AGCTGAACTCCTGCAGGACGGCACTGTCGTGTACATTCCAAGTGAGGGGGAAGAGCCAACACAAAGCACTACCGCAAATG
CTTCTGTGCAAAACGGAGCAGGAAAAGAGGCTTTGGTTAATATCAATACAGCGTCATTAGAGGAACTGCAAGCTATTTCC
GGGGTCGGTCCGTCAAAAGCAGAAGCTATAATAGCTTATCGTGAAGAAAACGGAAAATTTCAAGCCGTTGAAGACATTAC
AAATGTCTCGGGAATCGGCGAAAAATCATTTGAGAAAATAAAATCAGCCATCACAGTTAAGTGA

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (66-120)

• Helix-hairpin-helix motif (HHH_3) (143-205)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	65.7	100	0.657
comEA	Staphylococcus aureus MW2	36.364	100	0.367