Detailed information NTG1034680

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: AB6911_RS13860
• Genome accession: NZ_CP166481
• Coordinates: 2704574..2706907 (-)
• Length: 777 a.a.
• NCBI ID: WP_003325393.1
• Uniprot ID: -
• Organism: Bacillus atrophaeus strain globigii
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2699574..2711907

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB6911_RS13825 (AB6911_13805)	-	2699905..2700243 (-)	339	WP_004429433.1	YqxA family protein	-
AB6911_RS13830 (AB6911_13810)	spoIIP	2700262..2701470 (-)	1209	WP_013390604.1	stage II sporulation protein P	-
AB6911_RS13835 (AB6911_13815)	gpr	2701537..2702640 (-)	1104	WP_003325397.1	GPR endopeptidase	-
AB6911_RS13840 (AB6911_13820)	rpsT	2702845..2703111 (+)	267	WP_003325396.1	30S ribosomal protein S20	-
AB6911_RS13845 (AB6911_13825)	holA	2703126..2704169 (-)	1044	WP_003325395.1	DNA polymerase III subunit delta	-
AB6911_RS13850 (AB6911_13830)	-	2704209..2704358 (-)	150	WP_010789254.1	hypothetical protein	-
AB6911_RS13855 (AB6911_13835)	-	2704399..2704533 (+)	135	WP_003229983.1	YqzM family protein	-
AB6911_RS13860 (AB6911_13840)	comEC	2704574..2706907 (-)	2334	WP_003325393.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
AB6911_RS13865 (AB6911_13845)	-	2706914..2707483 (-)	570	WP_003325392.1	ComE operon protein 2	-
AB6911_RS13870 (AB6911_13850)	comEA	2707551..2708174 (-)	624	WP_003325391.1	helix-hairpin-helix domain-containing protein	Machinery gene
AB6911_RS13875 (AB6911_13855)	comER	2708258..2709079 (+)	822	WP_003325389.1	late competence protein ComER	-
AB6911_RS13880 (AB6911_13860)	-	2709149..2709889 (-)	741	WP_003325388.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	-
AB6911_RS13885 (AB6911_13865)	rsfS	2709886..2710242 (-)	357	WP_003325387.1	ribosome silencing factor	-
AB6911_RS13890 (AB6911_13870)	yqeK	2710259..2710819 (-)	561	WP_003325386.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
AB6911_RS13895 (AB6911_13875)	-	2710809..2711378 (-)	570	WP_003325385.1	nicotinate-nucleotide adenylyltransferase	-
AB6911_RS13900 (AB6911_13880)	yhbY	2711390..2711680 (-)	291	WP_003325384.1	ribosome assembly RNA-binding protein YhbY	-

Sequence

Protein

• Length: 777 a.a.
• Molecular weight: 86836.77 Da
• Isoelectric Point: 8.7901

>NTDB_id=1034680 AB6911_RS13860 WP_003325393.1 2704574..2706907(-) (comEC) [Bacillus atrophaeus strain globigii]
MKNTRLLLPLAAASATAGIAAASFFSALLIFVLSLFFVYIKTKQLSLVFVSLSAFTIYFFLTSVIDSHNVSSYDIGSYKL
RAVIQEIPKIDGDRMSMVVRTPDGEKWASSYKIESLAEKEKLSQIEPGTACTFTGSLKKPKNATVPGTFDYKQYLYSQHI
HWNYSITAIQNCSTADGIQYRLLSVRKSLISFVNDHVPESSAGIVQALILGDRFYLMDDVLEAYQKLGVVHLLAISGLHV
GIVTAGIFYVLIRIGVTREKVAILLLLFLPVYTILTGAAPSVMRAALMSGLYFIGSLWGKRMNPSIVICLSYLILLLFNP
YHLFQIGFQLSFAVSFSLILSSSIFKKLQSGGLVQLAMVSLIAQLGSLPILIYYFQQFSLISIPMNIIMVPFYTMFVMPF
SMIGFLLLSLSEPVGECLFYWFDYIMCWSDKLIKYAADIEQFTVIAARPNALVLFGLIGSIVVLLTAMEKSALYQRLLSV
LLFIAMLFLVVIFPRLDPEGEVDMLDIGQGDSMFISAPYQRGHVMIDTGGILSYLTEPWREKRHPFSLSEKVLIPFLTAK
GIKQLDALILTHADQDHIGEAKVLIKRHKVKQLIVPKGFVSEPNDEKVLRTAQQEGIRITEVKRGDTFQIKDLQFLVLSP
ETPDPNSKNNSSLVLWMKTGHLSWVLTGDLEKEGEQEIMKAFPDLKADILKAGHHGSKGSTGEEFVRQLKPKAAIISAGE
NNRYHHPHQEVLDILKAHSVRIFRTDQSGTIQYRFKSGFGTFSVYPPYDTTGMTETN

Nucleotide

• Length: 2334 bp

>NTDB_id=1034680 AB6911_RS13860 WP_003325393.1 2704574..2706907(-) (comEC) [Bacillus atrophaeus strain globigii]
ATGAAGAACACACGCCTTCTTTTGCCTCTGGCGGCAGCATCAGCAACGGCTGGCATAGCTGCTGCCTCCTTTTTCTCCGC
ACTTCTCATATTCGTTTTATCACTCTTCTTTGTTTATATCAAAACAAAACAGCTCTCACTCGTTTTTGTTAGTTTATCGG
CTTTTACGATCTATTTTTTCTTAACCTCTGTTATCGATTCTCATAATGTATCGTCCTATGACATCGGCTCCTATAAGCTT
CGGGCGGTGATTCAGGAAATTCCAAAGATTGACGGCGACCGTATGTCCATGGTAGTTCGAACGCCGGATGGGGAAAAGTG
GGCTTCATCATATAAAATAGAGTCGCTTGCTGAAAAGGAAAAACTTTCACAGATAGAGCCAGGGACGGCTTGTACGTTTA
CCGGTTCTTTAAAAAAACCGAAAAACGCAACGGTTCCCGGCACTTTCGATTATAAACAGTATCTGTACAGCCAGCATATT
CACTGGAATTACTCGATAACAGCAATCCAAAATTGCAGCACGGCAGATGGAATACAGTATAGGCTTTTAAGCGTGAGAAA
GTCTCTTATTTCATTTGTGAATGACCATGTTCCGGAATCCTCAGCAGGCATCGTGCAGGCGCTCATCCTGGGTGACAGAT
TTTATCTTATGGACGATGTGCTGGAAGCGTATCAAAAGCTCGGAGTTGTCCATCTGCTTGCGATTTCAGGGCTTCATGTA
GGTATTGTGACGGCTGGTATATTCTATGTGCTCATTCGAATTGGGGTAACGAGAGAGAAGGTTGCCATTCTGCTGCTGTT
GTTTTTGCCTGTTTATACGATTTTAACCGGAGCGGCTCCGTCTGTGATGCGCGCAGCTCTTATGTCAGGGCTTTATTTTA
TCGGCAGTTTGTGGGGAAAGCGTATGAACCCTTCAATAGTGATCTGTCTTTCTTATTTAATTCTCCTTTTGTTTAATCCG
TATCATCTTTTTCAAATAGGGTTTCAGCTCTCATTTGCCGTAAGTTTCTCTTTAATACTTTCTTCCTCTATTTTTAAAAA
ACTTCAAAGCGGGGGACTCGTGCAGCTCGCCATGGTGTCACTCATCGCTCAGCTTGGATCGCTTCCCATCCTTATCTATT
ATTTTCAGCAGTTTTCTCTTATCAGTATACCGATGAATATCATTATGGTGCCTTTTTATACGATGTTTGTCATGCCGTTT
TCTATGATAGGTTTTCTTTTGTTAAGTTTGTCTGAGCCGGTCGGTGAGTGCCTGTTTTATTGGTTTGATTACATCATGTG
CTGGAGTGACAAGCTGATAAAGTATGCTGCAGACATTGAGCAATTTACAGTGATTGCAGCCCGTCCAAATGCGCTTGTCT
TGTTTGGGCTGATTGGATCTATCGTTGTTTTGCTGACAGCCATGGAAAAATCCGCCCTTTACCAAAGACTTCTGTCTGTG
CTGCTCTTTATCGCAATGCTTTTTCTGGTGGTTATTTTTCCTCGCCTGGACCCCGAGGGAGAAGTGGATATGCTTGATAT
CGGTCAGGGAGACAGCATGTTTATCAGCGCTCCGTATCAGCGCGGCCATGTGATGATAGACACTGGAGGAATCCTTTCAT
ACTTAACAGAGCCATGGAGGGAAAAACGGCATCCTTTTTCGCTTAGCGAAAAGGTGCTTATTCCTTTCTTAACAGCAAAA
GGCATTAAACAGCTTGATGCCTTAATTTTGACTCATGCAGACCAAGACCATATAGGGGAAGCAAAGGTTCTGATCAAGCG
GCATAAAGTCAAACAGCTCATTGTGCCGAAAGGATTTGTTTCTGAACCGAATGATGAAAAAGTGCTGCGGACCGCACAGC
AAGAGGGAATTCGCATTACAGAGGTTAAACGAGGCGACACCTTTCAGATAAAGGATTTACAGTTTCTCGTACTGTCGCCT
GAGACTCCCGACCCGAACAGCAAAAATAACTCTTCTCTCGTGCTATGGATGAAAACAGGTCATCTCAGCTGGGTGCTGAC
AGGCGATCTCGAAAAGGAAGGGGAACAGGAGATCATGAAAGCTTTTCCGGATCTAAAAGCGGATATTTTAAAGGCGGGGC
ATCATGGCAGTAAAGGATCTACCGGAGAAGAGTTTGTCCGCCAGCTGAAGCCAAAAGCGGCAATTATTTCTGCCGGTGAG
AATAATCGGTATCACCATCCCCATCAGGAAGTCCTTGATATATTAAAAGCTCATTCTGTCCGCATTTTCCGCACTGATCA
AAGCGGGACGATCCAATACAGATTTAAAAGCGGGTTTGGAACCTTTTCTGTCTATCCTCCATATGATACAACAGGTATGA
CGGAGACGAACTAA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (25-169)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

• Competence protein (Competence) (208-467)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	65.508	100	0.655