Detailed information    

insolico Bioinformatically predicted

Overview

Name   phrF   Type   Regulator
Locus tag   QUE82_RS20110 Genome accession   NZ_AP028059
Coordinates   3759078..3759197 (+) Length   39 a.a.
NCBI ID   WP_009968329.1    Uniprot ID   A0A199WEM2
Organism   Bacillus subtilis subsp. natto strain NARUSE     
Function   antagonize RapF (predicted from homology)   
Competence regulation

Genomic Context

Location: 3754078..3764197
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  QUE82_RS20090 (BSNN_39410) albG 3754242..3754943 (+) 702 WP_014481222.1 antilisterial bacteriocin subtilosin biosynthesis protein AlbG -
  QUE82_RS20095 (BSNN_39420) ywhL 3754949..3756325 (-) 1377 WP_014481223.1 YncE family protein -
  QUE82_RS20100 (BSNN_39430) ywhK 3756364..3757719 (-) 1356 WP_014481224.1 YncE family protein -
  QUE82_RS22525 - 3757716..3757946 (-) 231 Protein_3897 hypothetical protein -
  QUE82_RS20105 (BSNN_39440) rapF 3757949..3759094 (+) 1146 WP_014481226.1 response regulator aspartate phosphatase RapF Regulator
  QUE82_RS20110 (BSNN_39450) phrF 3759078..3759197 (+) 120 WP_009968329.1 phosphatase RapF inhibitor PhrF Regulator
  QUE82_RS20115 (BSNN_39460) - 3759295..3759722 (+) 428 Protein_3900 YbaK/EbsC family protein -
  QUE82_RS20120 (BSNN_39470) speB 3759787..3760659 (-) 873 WP_003227545.1 agmatinase -
  QUE82_RS20125 (BSNN_39480) speE 3760720..3761550 (-) 831 WP_003227543.1 spermidine synthase -
  QUE82_RS20130 (BSNN_39490) pbpG 3761752..3763827 (+) 2076 WP_014481227.1 transglycosylase domain-containing protein -

Sequence

Protein


Download         Length: 39 a.a.        Molecular weight: 4199.10 Da        Isoelectric Point: 10.4997

>NTDB_id=103435 QUE82_RS20110 WP_009968329.1 3759078..3759197(+) (phrF) [Bacillus subtilis subsp. natto strain NARUSE]
MKLKSKLLLSCLALSTVFVATTIANAPTHQIEVAQRGMI

Nucleotide


Download         Length: 120 bp        

>NTDB_id=103435 QUE82_RS20110 WP_009968329.1 3759078..3759197(+) (phrF) [Bacillus subtilis subsp. natto strain NARUSE]
ATGAAATTGAAGTCTAAACTATTACTCTCTTGTCTGGCTCTAAGCACTGTGTTCGTGGCAACAACTATTGCAAATGCACC
TACACACCAAATTGAAGTTGCACAACGAGGAATGATTTAA

Domains

Predicted by InterproScan.

Rap-phr extracellular signalling (PhrC_PhrF)

(3-39)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A199WEM2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  phrF Bacillus subtilis subsp. subtilis str. 168

100

100

1
  phrC Bacillus subtilis subsp. subtilis str. 168

48.718

100

0.487

Multiple sequence alignment