Detailed information NTG0103434

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: QUE82_RS20105
• Genome accession: NZ_AP028059
• Coordinates: 3757949..3759094 (+)
• Length: 381 a.a.
• NCBI ID: WP_014481226.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. natto strain NARUSE
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3752949..3764094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
QUE82_RS20085 (BSNN_39400)	albF	3752965..3754245 (+)	1281	WP_014481221.1	pitrilysin family protein	-
QUE82_RS20090 (BSNN_39410)	albG	3754242..3754943 (+)	702	WP_014481222.1	antilisterial bacteriocin subtilosin biosynthesis protein AlbG	-
QUE82_RS20095 (BSNN_39420)	ywhL	3754949..3756325 (-)	1377	WP_014481223.1	YncE family protein	-
QUE82_RS20100 (BSNN_39430)	ywhK	3756364..3757719 (-)	1356	WP_014481224.1	YncE family protein	-
QUE82_RS22525	-	3757716..3757946 (-)	231	Protein_3897	hypothetical protein	-
QUE82_RS20105 (BSNN_39440)	rapF	3757949..3759094 (+)	1146	WP_014481226.1	response regulator aspartate phosphatase RapF	Regulator
QUE82_RS20110 (BSNN_39450)	phrF	3759078..3759197 (+)	120	WP_009968329.1	phosphatase RapF inhibitor PhrF	Regulator
QUE82_RS20115 (BSNN_39460)	-	3759295..3759722 (+)	428	Protein_3900	YbaK/EbsC family protein	-
QUE82_RS20120 (BSNN_39470)	speB	3759787..3760659 (-)	873	WP_003227545.1	agmatinase	-
QUE82_RS20125 (BSNN_39480)	speE	3760720..3761550 (-)	831	WP_003227543.1	spermidine synthase	-
QUE82_RS20130 (BSNN_39490)	pbpG	3761752..3763827 (+)	2076	WP_014481227.1	transglycosylase domain-containing protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45627.12 Da
• Isoelectric Point: 5.1503

>NTDB_id=103434 QUE82_RS20105 WP_014481226.1 3757949..3759094(+) (rapF) [Bacillus subtilis subsp. natto strain NARUSE]
MTGVISSSSIGEKINEWYMYIRRFSIPDAEYLRREIKQELDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLEKMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMKQTYFS
MDYARQAYEIYKEHEAYNIRLLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYED
AIPYFKRAIAVFEESNILPSLPQAYFLITQIHYKLGKMDKAHEYHSKGMAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAI
QGFFDFLESKMLYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQVRQLIQGGVSLYEIEV

Nucleotide

• Length: 1146 bp

>NTDB_id=103434 QUE82_RS20105 WP_014481226.1 3757949..3759094(+) (rapF) [Bacillus subtilis subsp. natto strain NARUSE]
GTGACAGGTGTCATATCTTCTTCTTCCATCGGAGAAAAGATTAACGAATGGTATATGTACATACGCCGATTCAGCATACC
CGATGCAGAATATTTGCGACGAGAAATCAAGCAAGAGCTGGATCAAATGGAAGAAGATCAAGACCTTCATTTGTACTATT
CACTGATGGAGTTTCGGCACAACCTAATGCTTGAGTACCTTGAACCGTTAGAAAAAATGAGGATTGAGGAACAGCCGAGA
CTGTCTGATCTGCTGCTTGAGATTGATAAAAAACAGGCTCGTTTAACTGGTCTGCTTGAGTACTATTTTAACTTCTTCAG
AGGCATGTACGAGCTGGACCAGCGGGAATATCTGTCGGCTATTAAATTTTTCAAAAAGGCCGAAAGCAAGCTGATATTCG
TTAAGGATCGGATAGAGAAAGCTGAGTTTTTCTTTAAGATGTCTGAATCTTATTACTATATGAAACAAACGTATTTTTCA
ATGGACTATGCACGGCAAGCATATGAAATATACAAAGAACATGAAGCTTATAATATAAGATTGCTGCAGTGTCATTCTTT
ATTTGCCACCAATTTTTTAGATTTAAAACAGTATGAGGATGCCATCTCACATTTTCAAAAAGCTTATTCTATGGCAGAAG
CTGAAAAGCAGCCCCAATTAATGGGGAGAACTTTGTACAATATCGGGCTTTGTAAAAACAGCCAAAGCCAATATGAGGAT
GCCATACCTTATTTCAAAAGAGCAATAGCTGTTTTTGAAGAATCAAATATTCTTCCTTCCTTACCTCAAGCGTATTTTTT
AATTACACAGATCCATTATAAATTAGGAAAAATGGATAAAGCTCATGAATATCATAGTAAGGGAATGGCTTATTCACAAA
AGGCCGGAGATGTAATATATTTATCAGAGTTTGAATTTTTGAAATCTTTATACTTATCAGGCCCGGATGAAGAAGCAATT
CAAGGATTTTTTGATTTTCTCGAAAGTAAAATGTTGTATGCTGATCTTGAAGATTTCGCTATTGATGTGGCAAAATATTA
TCATGAACGTAAAAATTTTCAAAAAGCTTCTGCTTATTTTTTGAAGGTGGAACAAGTAAGGCAACTTATTCAAGGAGGAG
TGAGTTTGTATGAAATTGAAGTCTAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_12) (223-290)

• Anaphase-promoting complex, cyclosome, subunit 3 (ANAPC3) (132-208)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	99.738	100	0.997
rapC	Bacillus subtilis subsp. subtilis str. 168	57.368	99.738	0.572