Detailed information
Bioinformatically predicted
Overview
| Name | comGA | Type | Machinery gene |
| Locus tag | AB8O67_RS13595 | Genome accession | NZ_CP166053 |
| Coordinates | 2584974..2586044 (-) | Length | 356 a.a. |
| NCBI ID | WP_326139066.1 | Uniprot ID | - |
| Organism | Bacillus halotolerans strain XYK2-4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2579974..2591044
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8O67_RS13550 (AB8O67_13555) | tapA | 2580448..2581209 (-) | 762 | WP_369888225.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB8O67_RS13555 (AB8O67_13560) | - | 2581486..2581809 (+) | 324 | WP_024122040.1 | YqzG/YhdC family protein | - |
| AB8O67_RS13560 (AB8O67_13565) | - | 2581852..2582031 (-) | 180 | WP_003236949.1 | YqzE family protein | - |
| AB8O67_RS13565 (AB8O67_13570) | comGG | 2582103..2582478 (-) | 376 | Protein_2625 | competence type IV pilus minor pilin ComGG | - |
| AB8O67_RS13570 (AB8O67_13575) | comGF | 2582479..2582862 (-) | 384 | WP_157722684.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB8O67_RS13575 (AB8O67_13580) | comGE | 2582888..2583235 (-) | 348 | WP_369888226.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AB8O67_RS13580 (AB8O67_13585) | comGD | 2583219..2583650 (-) | 432 | WP_044154579.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB8O67_RS13585 (AB8O67_13590) | comGC | 2583640..2583936 (-) | 297 | WP_010334925.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB8O67_RS13590 (AB8O67_13595) | comGB | 2583950..2584987 (-) | 1038 | WP_369888227.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB8O67_RS13595 (AB8O67_13600) | comGA | 2584974..2586044 (-) | 1071 | WP_326139066.1 | competence protein ComGA | Machinery gene |
| AB8O67_RS13600 (AB8O67_13605) | - | 2586367..2586777 (-) | 411 | WP_106293703.1 | CBS domain-containing protein | - |
| AB8O67_RS13605 (AB8O67_13610) | corA | 2586840..2587793 (-) | 954 | WP_059335416.1 | magnesium transporter CorA | - |
| AB8O67_RS13610 (AB8O67_13615) | - | 2587937..2589266 (+) | 1330 | Protein_2634 | hemolysin family protein | - |
| AB8O67_RS13615 (AB8O67_13620) | - | 2589346..2590185 (-) | 840 | WP_044154573.1 | STAS domain-containing protein | - |
| AB8O67_RS13625 (AB8O67_13630) | mgsR | 2590418..2590798 (-) | 381 | WP_052330300.1 | transcriptional regulator MgsR | - |
Sequence
Protein
Download Length: 356 a.a. Molecular weight: 40496.69 Da Isoelectric Point: 8.8394
>NTDB_id=1033207 AB8O67_RS13595 WP_326139066.1 2584974..2586044(-) (comGA) [Bacillus halotolerans strain XYK2-4]
MDSIEKTSKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLVCPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQQCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
MDSIEKTSKTLIEEAYRTKASDIHIVPRERDAIIHFRVDHALLKKRNMKKEECVRLISHFKFLSAMDIGERRKPQNGSLT
LKLKEGDVHLRMSTLPTINEESLVIRVMPQYNIPSIDKLSLFPKTGATLLSFLKHSHGMLIFTGPTGSGKTTTLYSLIQY
AKKHFNRNIVTLEDPVETRDEDVLQVQVNEKAGVTYSTGLKAILRHDPDMIILGEIRDAETAQIAVRAAMTGHLVLTSLH
TRDAKGAIYRLLEFGINMNEIEQTVIAIAAQRLVDLVCPFCEDGCSSVYCRLSRNVRRASVYELLYGKNLQQCIQEAKGD
NANYQYQTLRQIIRKGIALGYLTTNNYDRWVYHETD
Nucleotide
Download Length: 1071 bp
>NTDB_id=1033207 AB8O67_RS13595 WP_326139066.1 2584974..2586044(-) (comGA) [Bacillus halotolerans strain XYK2-4]
GTGGATTCGATAGAAAAAACAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGGCTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGAATGTCAACACTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTTTCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGGCCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGACTGAAGGCAATTTTGCGCCATGACCCCGATATGATCATTTTAG
GTGAGATTAGAGACGCTGAAACAGCACAAATCGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGTTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCAGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
GTGGATTCGATAGAAAAAACAAGCAAAACTTTAATTGAAGAGGCATATAGGACGAAGGCCTCTGACATTCACATTGTGCC
GAGGGAACGGGACGCAATCATTCATTTTCGGGTTGACCATGCATTGCTGAAAAAGCGAAACATGAAAAAAGAAGAGTGTG
TAAGGCTCATTTCTCATTTTAAGTTTCTCTCAGCTATGGACATAGGGGAAAGAAGAAAGCCGCAAAATGGATCTCTTACT
CTAAAATTAAAAGAGGGTGACGTTCACTTAAGAATGTCAACACTCCCGACAATTAACGAAGAAAGCCTCGTCATCAGAGT
GATGCCTCAGTATAATATCCCTTCGATTGACAAACTGTCTTTATTCCCAAAGACAGGAGCCACCTTGCTTTCATTTTTAA
AACACTCCCACGGCATGCTGATTTTTACCGGGCCAACAGGCTCTGGGAAAACAACAACATTATATTCTCTGATCCAATAT
GCAAAAAAACATTTTAATCGAAACATTGTCACACTTGAAGATCCAGTGGAAACGAGGGATGAAGATGTTCTTCAAGTGCA
GGTGAATGAAAAAGCCGGTGTCACATATTCCACAGGACTGAAGGCAATTTTGCGCCATGACCCCGATATGATCATTTTAG
GTGAGATTAGAGACGCTGAAACAGCACAAATCGCGGTGCGGGCAGCGATGACTGGTCATTTAGTGCTGACGAGCCTTCAT
ACGAGAGATGCGAAGGGCGCGATTTACAGGCTGCTTGAATTTGGCATTAATATGAATGAAATCGAGCAAACGGTTATTGC
GATAGCGGCTCAGCGTTTAGTTGATTTGGTTTGCCCGTTTTGTGAAGACGGATGTTCATCAGTGTATTGCCGCCTGTCAC
GAAATGTCAGGAGAGCAAGCGTATACGAGCTGCTTTACGGGAAAAACCTTCAGCAGTGTATCCAGGAAGCGAAAGGGGAC
AATGCAAATTACCAATATCAAACGCTGCGTCAAATTATAAGAAAAGGGATTGCGCTCGGCTATTTAACGACAAACAACTA
TGACCGGTGGGTTTATCATGAAACAGATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGA | Bacillus subtilis subsp. subtilis str. 168 |
95.787 |
100 |
0.958 |