Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | AB8O67_RS13590 | Genome accession | NZ_CP166053 |
| Coordinates | 2583950..2584987 (-) | Length | 345 a.a. |
| NCBI ID | WP_369888227.1 | Uniprot ID | - |
| Organism | Bacillus halotolerans strain XYK2-4 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2578950..2589987
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AB8O67_RS13540 (AB8O67_13545) | tasA | 2579042..2579827 (-) | 786 | WP_059293609.1 | biofilm matrix protein TasA | - |
| AB8O67_RS13545 (AB8O67_13550) | sipW | 2579892..2580476 (-) | 585 | WP_059293608.1 | signal peptidase I SipW | - |
| AB8O67_RS13550 (AB8O67_13555) | tapA | 2580448..2581209 (-) | 762 | WP_369888225.1 | amyloid fiber anchoring/assembly protein TapA | - |
| AB8O67_RS13555 (AB8O67_13560) | - | 2581486..2581809 (+) | 324 | WP_024122040.1 | YqzG/YhdC family protein | - |
| AB8O67_RS13560 (AB8O67_13565) | - | 2581852..2582031 (-) | 180 | WP_003236949.1 | YqzE family protein | - |
| AB8O67_RS13565 (AB8O67_13570) | comGG | 2582103..2582478 (-) | 376 | Protein_2625 | competence type IV pilus minor pilin ComGG | - |
| AB8O67_RS13570 (AB8O67_13575) | comGF | 2582479..2582862 (-) | 384 | WP_157722684.1 | competence type IV pilus minor pilin ComGF | Machinery gene |
| AB8O67_RS13575 (AB8O67_13580) | comGE | 2582888..2583235 (-) | 348 | WP_369888226.1 | competence type IV pilus minor pilin ComGE | Machinery gene |
| AB8O67_RS13580 (AB8O67_13585) | comGD | 2583219..2583650 (-) | 432 | WP_044154579.1 | competence type IV pilus minor pilin ComGD | Machinery gene |
| AB8O67_RS13585 (AB8O67_13590) | comGC | 2583640..2583936 (-) | 297 | WP_010334925.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| AB8O67_RS13590 (AB8O67_13595) | comGB | 2583950..2584987 (-) | 1038 | WP_369888227.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| AB8O67_RS13595 (AB8O67_13600) | comGA | 2584974..2586044 (-) | 1071 | WP_326139066.1 | competence protein ComGA | Machinery gene |
| AB8O67_RS13600 (AB8O67_13605) | - | 2586367..2586777 (-) | 411 | WP_106293703.1 | CBS domain-containing protein | - |
| AB8O67_RS13605 (AB8O67_13610) | corA | 2586840..2587793 (-) | 954 | WP_059335416.1 | magnesium transporter CorA | - |
| AB8O67_RS13610 (AB8O67_13615) | - | 2587937..2589266 (+) | 1330 | Protein_2634 | hemolysin family protein | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39910.12 Da Isoelectric Point: 9.6182
>NTDB_id=1033206 AB8O67_RS13590 WP_369888227.1 2583950..2584987(-) (comGB) [Bacillus halotolerans strain XYK2-4]
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLANAISRLREGESFYHVLKSLSFHKEAIGICF
FAETHGELPASMIQSGELLERKAAQAEQIKKVLRYPLFLIFTVVVMLYMLQNIIIPQFSGIYQSMNVETSRTTDIIFAFF
QHLDAVFILMAILAAGTGLYYWFVFKKKSPDHQMLICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIERLKAGETIEAALCKRPFYENDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAGMILIVYLSMLLPMYQMMNQM
MKQIRKVWPLKDQAYLLKRLGEMTAGGYSLLDGLRLMQLQMNKRQLADLANAISRLREGESFYHVLKSLSFHKEAIGICF
FAETHGELPASMIQSGELLERKAAQAEQIKKVLRYPLFLIFTVVVMLYMLQNIIIPQFSGIYQSMNVETSRTTDIIFAFF
QHLDAVFILMAILAAGTGLYYWFVFKKKSPDHQMLICVSIPLFGKLVRLFNSYFFSLQLSSLLASGLSIYDSLKAFRHQT
FLPFYRHEAEQMIERLKAGETIEAALCKRPFYENDFSKVISHGQLSGRLDRELFTYSQFILQRLEDKSQKWTGILQPIIY
GFVAGMILIVYLSMLLPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=1033206 AB8O67_RS13590 WP_369888227.1 2583950..2584987(-) (comGB) [Bacillus halotolerans strain XYK2-4]
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGTGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGATTGCGCCTGATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTAACGCCATAA
GCCGGTTGAGAGAAGGGGAATCGTTTTACCATGTATTAAAGAGCTTGTCATTTCATAAGGAAGCCATCGGTATTTGTTTT
TTTGCTGAAACACATGGAGAATTGCCGGCTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAGCAGCGCAGGCAGA
ACAGATAAAAAAGGTGTTGCGATATCCTCTTTTCCTCATCTTTACCGTTGTTGTCATGCTTTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACCTCACGCACAACAGACATCATTTTTGCGTTTTTT
CAGCACCTTGATGCTGTGTTCATATTAATGGCCATTTTGGCTGCAGGAACAGGACTTTATTATTGGTTTGTGTTCAAGAA
AAAATCCCCTGACCATCAAATGCTCATTTGCGTAAGTATTCCTTTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTGCTAGCATCAGGTCTTTCTATTTATGACAGTTTGAAAGCATTTAGGCATCAAACG
TTTCTCCCTTTTTACCGCCATGAAGCTGAACAAATGATTGAACGGTTAAAAGCCGGTGAAACCATTGAAGCTGCTTTATG
CAAACGGCCTTTTTACGAAAATGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGCTTGGATCGGGAACTCT
TCACATACAGCCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAC
GGATTTGTCGCAGGGATGATTTTAATTGTTTATCTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAACAGATTAGAAAAGTTTGGCCGTTAAAGGATCAAGCCTATTTACTGAAAAGGCTGGGTGAAATGACAGCGGGCGG
ATACAGTCTTTTAGACGGATTGCGCCTGATGCAGCTGCAAATGAATAAAAGGCAGCTGGCGGACTTGGCTAACGCCATAA
GCCGGTTGAGAGAAGGGGAATCGTTTTACCATGTATTAAAGAGCTTGTCATTTCATAAGGAAGCCATCGGTATTTGTTTT
TTTGCTGAAACACATGGAGAATTGCCGGCTTCCATGATTCAGAGCGGAGAGCTGCTGGAACGAAAAGCAGCGCAGGCAGA
ACAGATAAAAAAGGTGTTGCGATATCCTCTTTTCCTCATCTTTACCGTTGTTGTCATGCTTTATATGCTGCAAAACATCA
TCATCCCTCAGTTTTCCGGTATTTATCAATCGATGAATGTAGAAACCTCACGCACAACAGACATCATTTTTGCGTTTTTT
CAGCACCTTGATGCTGTGTTCATATTAATGGCCATTTTGGCTGCAGGAACAGGACTTTATTATTGGTTTGTGTTCAAGAA
AAAATCCCCTGACCATCAAATGCTCATTTGCGTAAGTATTCCTTTGTTTGGAAAGCTGGTCAGGCTGTTTAACAGCTACT
TTTTTTCTTTACAGCTGAGCAGTCTGCTAGCATCAGGTCTTTCTATTTATGACAGTTTGAAAGCATTTAGGCATCAAACG
TTTCTCCCTTTTTACCGCCATGAAGCTGAACAAATGATTGAACGGTTAAAAGCCGGTGAAACCATTGAAGCTGCTTTATG
CAAACGGCCTTTTTACGAAAATGATTTTTCAAAAGTAATATCTCATGGCCAGCTAAGCGGCCGCTTGGATCGGGAACTCT
TCACATACAGCCAGTTTATATTGCAGCGGCTTGAGGACAAGTCACAAAAATGGACAGGCATTCTTCAGCCCATTATTTAC
GGATTTGTCGCAGGGATGATTTTAATTGTTTATCTATCGATGCTCCTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
81.115 |
93.623 |
0.759 |