Detailed information NTG1033126

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: JNUCC21_RS13130
• Genome accession: NZ_CP166019
• Coordinates: 2641235..2641672 (-)
• Length: 145 a.a.
• NCBI ID: WP_007612572.1
• Uniprot ID: -
• Organism: Bacillus sp. JNUCC-21
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2636235..2646672

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNUCC21_RS13080 (JNUCC21_13110)	sinI	2636618..2636791 (+)	174	WP_003153105.1	anti-repressor SinI	Regulator
JNUCC21_RS13085 (JNUCC21_13115)	sinR	2636825..2637160 (+)	336	WP_003153104.1	transcriptional regulator SinR	Regulator
JNUCC21_RS13090 (JNUCC21_13120)	tasA	2637208..2637993 (-)	786	WP_007408329.1	biofilm matrix protein TasA	-
JNUCC21_RS13095 (JNUCC21_13125)	sipW	2638058..2638642 (-)	585	WP_015240205.1	signal peptidase I SipW	-
JNUCC21_RS13100 (JNUCC21_13130)	tapA	2638614..2639285 (-)	672	WP_150941310.1	amyloid fiber anchoring/assembly protein TapA	-
JNUCC21_RS13105 (JNUCC21_13135)	-	2639544..2639873 (+)	330	WP_012117979.1	DUF3889 domain-containing protein	-
JNUCC21_RS13110 (JNUCC21_13140)	-	2639914..2640093 (-)	180	WP_003153093.1	YqzE family protein	-
JNUCC21_RS13115 (JNUCC21_13145)	comGG	2640150..2640527 (-)	378	WP_012117980.1	competence type IV pilus minor pilin ComGG	Machinery gene
JNUCC21_RS13120 (JNUCC21_13150)	comGF	2640528..2641028 (-)	501	WP_257474763.1	competence type IV pilus minor pilin ComGF	-
JNUCC21_RS13125 (JNUCC21_13155)	comGE	2640937..2641251 (-)	315	WP_012117982.1	competence type IV pilus minor pilin ComGE	-
JNUCC21_RS13130 (JNUCC21_13160)	comGD	2641235..2641672 (-)	438	WP_007612572.1	competence type IV pilus minor pilin ComGD	Machinery gene
JNUCC21_RS13135 (JNUCC21_13165)	comGC	2641662..2641970 (-)	309	WP_003153087.1	competence type IV pilus major pilin ComGC	Machinery gene
JNUCC21_RS13140 (JNUCC21_13170)	comGB	2641975..2643012 (-)	1038	WP_218791295.1	competence type IV pilus assembly protein ComGB	Machinery gene
JNUCC21_RS13145 (JNUCC21_13175)	comGA	2642999..2644069 (-)	1071	WP_007408320.1	competence type IV pilus ATPase ComGA	Machinery gene
JNUCC21_RS13150 (JNUCC21_13180)	-	2644262..2645212 (-)	951	WP_007408319.1	magnesium transporter CorA family protein	-
JNUCC21_RS13155 (JNUCC21_13185)	-	2645358..2646659 (+)	1302	WP_369878206.1	hemolysin family protein	-

Sequence

Protein

• Length: 145 a.a.
• Molecular weight: 16254.76 Da
• Isoelectric Point: 10.1850

>NTDB_id=1033126 JNUCC21_RS13130 WP_007612572.1 2641235..2641672(-) (comGD) [Bacillus sp. JNUCC-21]
MNNNRRTENGFTLLESLIVLSLASVLLTVLFTTVPPVCTHLAVRQKTEQLQKDIQLAQETAIAEHKRTKITFLPKEHKYK
LQSGGRIVERSFDSLHITLVTLPESLEFNEKGHPNSGGKIQLKSAGFTYEITVYLGSGNVHAKRK

Nucleotide

• Length: 438 bp

>NTDB_id=1033126 JNUCC21_RS13130 WP_007612572.1 2641235..2641672(-) (comGD) [Bacillus sp. JNUCC-21]
TTGAACAATAACAGGCGGACAGAAAATGGGTTTACCCTTCTTGAAAGCCTGATTGTGTTAAGCCTGGCGTCCGTCCTGCT
GACGGTTTTGTTCACGACGGTTCCGCCGGTCTGCACCCACCTTGCCGTGCGGCAAAAAACAGAGCAGCTCCAAAAAGATA
TTCAGCTTGCTCAGGAAACGGCTATCGCAGAACATAAAAGAACAAAAATCACTTTTCTTCCAAAAGAGCATAAATACAAA
CTGCAGTCAGGCGGAAGGATTGTCGAGCGTTCTTTTGACTCGCTTCACATTACACTTGTGACTTTACCGGAGAGCCTTGA
ATTTAACGAAAAAGGCCATCCGAATTCGGGAGGAAAGATTCAATTGAAGAGCGCCGGGTTCACCTATGAGATCACAGTTT
ACTTAGGGAGCGGAAATGTCCATGCTAAACGGAAATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (5-31)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Bacillus subtilis subsp. subtilis str. 168	55.479	100	0.559