Detailed information NTG1033058

Bioinformatically predicted

Overview

• Name: comGF
• Type: Machinery gene
• Locus tag: AB9A07_RS07655
• Genome accession: NZ_CP166018
• Coordinates: 1580639..1581136 (-)
• Length: 165 a.a.
• NCBI ID: WP_369947402.1
• Uniprot ID: -
• Organism: Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1575639..1586136

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB9A07_RS07630 (AB9A07_07640)	gcvPB	1575801..1577273 (-)	1473	WP_000202188.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPB	-
AB9A07_RS07635 (AB9A07_07645)	gcvPA	1577266..1578612 (-)	1347	WP_000019691.1	aminomethyl-transferring glycine dehydrogenase subunit GcvPA	-
AB9A07_RS07640 (AB9A07_07650)	gcvT	1578632..1579723 (-)	1092	WP_000093349.1	glycine cleavage system aminomethyltransferase GcvT	-
AB9A07_RS07645 (AB9A07_07655)	-	1579882..1580406 (-)	525	WP_001015121.1	shikimate kinase	-
AB9A07_RS07650 (AB9A07_07660)	-	1580396..1580542 (-)	147	WP_001789879.1	hypothetical protein	-
AB9A07_RS07655 (AB9A07_07665)	comGF	1580639..1581136 (-)	498	WP_369947402.1	competence type IV pilus minor pilin ComGF	Machinery gene
AB9A07_RS07660 (AB9A07_07670)	comGE	1581054..1581353 (-)	300	WP_000844413.1	hypothetical protein	Machinery gene
AB9A07_RS07665 (AB9A07_07675)	comGD	1581340..1581786 (-)	447	WP_072433556.1	competence type IV pilus minor pilin ComGD	Machinery gene
AB9A07_RS07670 (AB9A07_07680)	comGC	1581764..1582075 (-)	312	WP_000472256.1	competence type IV pilus major pilin ComGC	Machinery gene
AB9A07_RS07675 (AB9A07_07685)	comGB	1582089..1583159 (-)	1071	WP_000776421.1	competence type IV pilus assembly protein ComGB	Machinery gene
AB9A07_RS07680 (AB9A07_07690)	comGA	1583131..1584105 (-)	975	WP_000697220.1	competence type IV pilus ATPase ComGA	Machinery gene
AB9A07_RS07685 (AB9A07_07695)	-	1584157..1584780 (-)	624	WP_001223008.1	MBL fold metallo-hydrolase	-
AB9A07_RS07690 (AB9A07_07700)	-	1584777..1585106 (-)	330	WP_001018871.1	MTH1187 family thiamine-binding protein	-
AB9A07_RS07695 (AB9A07_07705)	-	1585106..1586092 (-)	987	WP_000161314.1	ROK family glucokinase	-

Sequence

Protein

• Length: 165 a.a.
• Molecular weight: 19198.98 Da
• Isoelectric Point: 10.4050

>NTDB_id=1033058 AB9A07_RS07655 WP_369947402.1 1580639..1581136(-) (comGF) [Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15]
MILSKVTNKFVLFQKIPLLIKRHVYSINVKAFSLIEMLVAMMVISITLLIVPDLIRLSKTFLIESRELTTVDFEFFSRDI
LEDFKGVDRNDIELRQQRIILHKGEEMIKYKLINNKIIKVVNDRGNITMINNVTSFTANIYYKSIIKITITVKVGTNVQT
KTIYV

Nucleotide

• Length: 498 bp

>NTDB_id=1033058 AB9A07_RS07655 WP_369947402.1 1580639..1581136(-) (comGF) [Staphylococcus aureus strain GIMC7004:SaO-15 isolate GIMC7004:SaO-15]
ATGATATTAAGCAAAGTGACCAACAAATTTGTGCTATTTCAAAAAATACCACTTCTTATCAAAAGACATGTATACAGTAT
TAATGTCAAAGCTTTTTCGCTCATTGAAATGTTAGTAGCGATGATGGTTATAAGTATAACTTTACTAATTGTTCCAGACT
TAATTAGACTTAGCAAAACTTTTCTAATTGAAAGTAGGGAATTAACAACTGTAGATTTCGAATTTTTCTCAAGAGATATT
CTAGAGGATTTTAAAGGAGTAGATAGAAACGATATTGAACTTAGGCAACAGCGTATCATTTTACATAAAGGTGAAGAAAT
GATCAAATACAAATTAATAAATAATAAAATTATTAAAGTTGTAAATGACAGAGGAAATATAACAATGATTAATAATGTTA
CTTCATTTACTGCAAATATCTACTATAAATCCATTATTAAAATAACGATAACAGTTAAAGTCGGTACAAATGTGCAGACT
AAAACTATTTATGTATAA

Domains

Predicted by InterproScan.

• Putative Competence protein ComGF (ComGF) (68-155)

• Prokaryotic N-terminal methylation motif (N_methyl) (28-51)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGF	Staphylococcus aureus MW2	96.364	100	0.964
comGF	Staphylococcus aureus N315	96.364	100	0.964