Detailed information NTG1032583

Bioinformatically predicted

Overview

• Name: hexA
• Type: Machinery gene
• Locus tag: LSAJ54_RS01805
• Genome accession: NZ_LT960790
• Coordinates: 385211..387814 (+)
• Length: 867 a.a.
• NCBI ID: WP_099947250.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain J54
• Function: DNA mismatch repair (predicted from homology) Homologous recombination

Genomic Context

Location: 380211..392814

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAJ54_RS01790 (LSAJ54_0380)	groL	380253..381878 (+)	1626	WP_035146245.1	chaperonin GroEL	-
LSAJ54_RS10140	-	381916..382068 (-)	153	WP_155516314.1	hypothetical protein	-
LSAJ54_RS01795 (LSAJ54_0381)	-	382377..384206 (+)	1830	WP_016264636.1	APC family permease	-
LSAJ54_RS01800 (LSAJ54_0382)	-	384383..385189 (+)	807	WP_011374070.1	TIGR00282 family metallophosphoesterase	-
LSAJ54_RS01805 (LSAJ54_0383)	hexA	385211..387814 (+)	2604	WP_099947250.1	DNA mismatch repair protein MutS	Machinery gene
LSAJ54_RS01810 (LSAJ54_0384)	hexB	387838..389799 (+)	1962	WP_146105228.1	DNA mismatch repair endonuclease MutL	Machinery gene
LSAJ54_RS01815 (LSAJ54_0385)	-	389799..390344 (+)	546	WP_099947252.1	Maf family protein	-
LSAJ54_RS01820 (LSAJ54_0386)	-	390357..390920 (+)	564	WP_197704868.1	TIGR00730 family Rossman fold protein	-
LSAJ54_RS01825 (LSAJ54_0387)	ruvA	391171..391782 (+)	612	WP_099947253.1	Holliday junction branch migration protein RuvA	Machinery gene
LSAJ54_RS01830 (LSAJ54_0388)	ruvB	391795..392802 (+)	1008	WP_011374076.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene

Sequence

Protein

• Length: 867 a.a.
• Molecular weight: 96776.59 Da
• Isoelectric Point: 5.3178

>NTDB_id=1032583 LSAJ54_RS01805 WP_099947250.1 385211..387814(+) (hexA) [Latilactobacillus sakei strain J54]
MPQKTKETPMMAQYQKVKDQYPDAFLFYRLGDFYELFNDDAVKASQLLELTLTARNKNAADPIPMCGVPHHAAQNYIDIL
VDQGYKVAICEQMEDPKTAKGMVKREVVQLVTPGTVMDEKAGHAKQNNYLTAVVAQGDQFGFAYTDLSTGEMKVSQISSL
DVLLNEMLSLQTKEVVVNHDVPSEVVQAFVQQQILVSYQDEGADTAEVSFVSQNISQPLALAVIKQLVVYLATTQKRHLG
HLQRAQAYEPSQYLKLDHSAKMNLELTASLRTGHKSGTLLWLLDETKTAMGGRLLKQWLERPLLDLNQIKNRQNQVASFL
QHYFERTNLQEALTKVYDLERLAGRVAFGSVNGRDLIQLKTSLEQIPKIKDVLTGINETQAFDQALTRLDPVDDVRTLIE
TAINPDSPISVTDGGIIQDGYDEQLDQYRNAMSNGKQWLAQLEAQEREATGIHNLKIGFNRVFGYYIEVTRANLSSLPEG
RYERKQTLTNAERFITPELKEKEQLILEAEERSTALEYELFTQVREQVKLQIERLQTLAKGVAALDVLQSFAVVSESYHY
VQPTLRTDSREIDLVDGRHPVVEKVLGRQKYIPNAVQMGKETDMLLITGPNMSGKSTYMRQLALTVIMAQMGCFVPAKSA
NLPVFDQIFTRIGAADDLISGQSTFMVEMMEANRAIMSATANSLILFDEIGRGTATYDGMALAQAIIEYIHDHVHAKTLF
STHYHELTALADTLTALRNVHVGAVEENGELVFLHKMLAGPADKSYGIHVAKLAGMPETLLQRADVILGQLEDKPKAPVQ
PATVAPAQPAVAAVEEQMALFEPEVAAPVDKKTDKVVAAIKNFDLMSATPLEALNQLYEWQKQLNKH

Nucleotide

• Length: 2604 bp

>NTDB_id=1032583 LSAJ54_RS01805 WP_099947250.1 385211..387814(+) (hexA) [Latilactobacillus sakei strain J54]
ATGCCGCAAAAAACAAAAGAAACGCCAATGATGGCCCAATATCAAAAGGTTAAGGATCAATATCCAGACGCCTTTTTATT
TTATAGATTGGGTGATTTTTACGAATTATTCAATGACGATGCTGTTAAAGCATCACAACTTTTAGAATTAACGCTGACAG
CGCGTAATAAGAATGCAGCAGACCCCATTCCGATGTGTGGTGTGCCCCATCATGCAGCGCAAAACTACATTGATATTTTA
GTGGATCAAGGTTACAAGGTCGCCATTTGTGAACAGATGGAAGATCCTAAAACGGCTAAGGGCATGGTCAAACGCGAAGT
CGTTCAATTAGTAACACCTGGGACTGTGATGGACGAAAAAGCCGGTCACGCTAAACAAAATAATTATTTAACGGCAGTCG
TTGCACAGGGCGATCAATTTGGCTTCGCCTATACAGATTTATCCACAGGTGAAATGAAGGTTAGCCAAATCAGTAGTTTA
GATGTGTTATTAAACGAAATGTTGAGTTTACAAACCAAAGAAGTGGTTGTGAATCATGATGTCCCAAGCGAAGTCGTTCA
AGCCTTTGTCCAACAACAAATCTTGGTTTCTTATCAAGATGAGGGGGCCGATACGGCAGAGGTCAGTTTTGTTTCTCAAA
ACATCTCACAACCACTAGCGTTAGCCGTCATTAAACAATTAGTTGTTTATTTAGCAACGACGCAAAAGCGGCACTTGGGT
CATTTACAACGCGCCCAAGCCTATGAACCTTCTCAATACTTGAAGTTGGATCATTCGGCTAAGATGAACCTCGAATTGAC
GGCTTCATTACGAACTGGTCATAAGAGCGGGACGTTATTGTGGCTACTGGATGAAACAAAGACTGCGATGGGTGGTCGCT
TATTAAAACAATGGTTGGAACGACCATTGTTGGATTTAAACCAGATTAAGAACCGGCAAAACCAAGTCGCTAGTTTCTTA
CAGCATTACTTTGAACGGACGAACCTTCAAGAAGCCCTAACTAAAGTTTATGATTTGGAACGTCTAGCAGGCCGCGTTGC
TTTTGGGAGCGTTAATGGGCGCGATTTGATTCAATTAAAAACATCCTTAGAACAGATTCCAAAGATTAAAGATGTTTTGA
CGGGCATTAACGAAACGCAGGCTTTTGATCAAGCGTTAACGCGTTTGGATCCAGTTGATGATGTGCGGACGTTAATTGAA
ACAGCGATTAATCCGGATTCACCGATTTCAGTGACTGATGGTGGGATTATTCAAGATGGCTACGACGAACAACTTGATCA
ATACCGCAATGCGATGTCTAACGGCAAGCAGTGGTTGGCGCAATTAGAGGCGCAAGAACGAGAAGCCACGGGCATTCATA
ATTTGAAAATCGGCTTTAACCGCGTCTTTGGGTATTATATCGAAGTCACGCGTGCTAACTTGAGTTCATTACCGGAAGGG
CGGTATGAACGGAAACAAACGTTAACCAACGCCGAACGATTTATCACACCGGAATTAAAAGAAAAAGAACAACTGATTTT
AGAGGCGGAAGAACGCTCAACCGCTCTAGAATACGAATTGTTTACCCAAGTTCGGGAACAAGTGAAGTTACAGATTGAAC
GGCTCCAAACATTGGCTAAAGGCGTAGCGGCCCTAGATGTCTTGCAAAGTTTTGCGGTCGTCAGCGAAAGCTACCACTAT
GTCCAACCAACACTAAGAACTGATAGTCGCGAAATTGATTTAGTCGATGGCCGTCATCCGGTGGTTGAAAAGGTATTGGG
ACGCCAAAAATATATCCCGAATGCTGTTCAAATGGGCAAAGAAACGGATATGTTGTTAATTACCGGGCCTAATATGTCTG
GTAAAAGTACCTACATGCGGCAATTGGCCTTAACGGTCATCATGGCGCAGATGGGTTGTTTTGTACCTGCCAAGTCAGCG
AACTTGCCTGTATTTGACCAAATCTTTACCCGTATTGGTGCGGCAGATGATTTGATTTCAGGGCAAAGTACGTTTATGGT
AGAAATGATGGAAGCTAACCGTGCGATTATGAGTGCGACCGCCAATAGTTTAATTCTTTTCGATGAAATTGGTCGGGGAA
CGGCAACTTACGATGGGATGGCCTTGGCACAAGCGATTATCGAATATATCCATGATCACGTCCACGCCAAGACGCTCTTT
TCAACGCATTATCATGAATTGACGGCTTTAGCTGATACATTGACCGCCCTCCGTAACGTGCATGTTGGTGCGGTTGAGGA
AAATGGCGAGTTGGTCTTCTTACACAAGATGTTAGCCGGACCTGCGGATAAGTCTTACGGGATTCATGTCGCTAAACTAG
CGGGCATGCCAGAAACCTTATTACAACGGGCCGATGTTATTTTAGGTCAATTAGAAGATAAACCAAAGGCACCGGTGCAA
CCAGCAACAGTGGCGCCAGCACAACCGGCTGTAGCGGCTGTCGAAGAACAGATGGCACTTTTTGAACCAGAAGTGGCGGC
TCCGGTCGATAAGAAAACAGATAAAGTGGTAGCGGCAATTAAGAATTTTGATTTAATGAGCGCCACACCACTAGAAGCCC
TCAATCAATTATATGAGTGGCAAAAGCAATTAAATAAACATTAA

Domains

Predicted by InterProScan.

• MutS domain I (MutS_I) (8-119)

• MutS domain II (MutS_II) (128-243)

• MutS family domain IV (MutS_IV) (420-512)

• MutS domain V (MutS_V) (605-792)

• MutS domain III (MutS_III) (263-552)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
hexA	Streptococcus pneumoniae R6	52.139	99.769	0.52
mutS	Pseudomonas stutzeri strain ATCC 17587	38.655	100	0.391