Detailed information NTG1032260

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: LSAF01_RS02095
• Genome accession: NZ_LT960777
• Coordinates: 443103..444104 (+)
• Length: 333 a.a.
• NCBI ID: WP_099947618.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain FLEC01
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 438103..449104

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LSAF01_RS02070 (LSAF01_0439)	-	438534..439430 (-)	897	WP_056947934.1	DUF368 domain-containing protein	-
LSAF01_RS02075 (LSAF01_0440)	-	439455..440342 (-)	888	WP_011374119.1	mechanosensitive ion channel family protein	-
LSAF01_RS02080 (LSAF01_0441)	-	440500..440934 (+)	435	WP_016264674.1	DUF948 domain-containing protein	-
LSAF01_RS02085 (LSAF01_0442)	-	440940..441377 (+)	438	WP_056947938.1	YtxH domain-containing protein	-
LSAF01_RS02090 (LSAF01_0443)	-	441789..442886 (-)	1098	WP_056947940.1	M24 family metallopeptidase	-
LSAF01_RS02095 (LSAF01_0444)	ccpA	443103..444104 (+)	1002	WP_099947618.1	catabolite control protein A	Regulator
LSAF01_RS02100 (LSAF01_0445)	-	444153..446708 (-)	2556	WP_056947942.1	transglycosylase domain-containing protein	-
LSAF01_RS02105 (LSAF01_0446)	-	446992..447699 (+)	708	WP_011374126.1	glucosamine-6-phosphate deaminase	-
LSAF01_RS02110 (LSAF01_0447)	-	447870..448574 (-)	705	WP_056947447.1	DUF4811 domain-containing protein	-

Sequence

Protein

• Length: 333 a.a.
• Molecular weight: 36363.53 Da
• Isoelectric Point: 4.7948

>NTDB_id=1032260 LSAF01_RS02095 WP_099947618.1 443103..444104(+) (ccpA) [Latilactobacillus sakei strain FLEC01]
MEKQTITIYDVAREADVSMATVSRVVNGNPNVKPATRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVIIPDVSDIYFAS
LARGIDDVATMYKYNIILANSDENNQKEVQVLNTLLAKQVDGLIYMGHSISDAIRAEFARSKTPIVLAGSIDPDEQVGSV
NIDYVAAVKDATLKLIKNGNEKVAFICGNLDFPINSKYRLRGYKDTLNEAGIPYDESLIFETEYSYSAGEALFGKVQATG
ATAAVVSDDELAVGVLNAAVDAGVNIPTDFEIVTSNNTKLTEMVRPKMTSISQPLYDMGAVGMRLLTKMMNKEEIDDKTI
LLPYSIVDRQSTK

Nucleotide

• Length: 1002 bp

>NTDB_id=1032260 LSAF01_RS02095 WP_099947618.1 443103..444104(+) (ccpA) [Latilactobacillus sakei strain FLEC01]
ATGGAAAAACAAACAATTACAATTTACGACGTTGCGCGTGAAGCTGACGTATCAATGGCGACCGTCTCACGGGTTGTTAA
CGGGAACCCCAACGTTAAGCCTGCCACTCGCAAGAAAGTGCTTGAAGTGATCGACCGTTTAGACTATCGTCCTAATGCTG
TTGCTCGTGGTTTGGCAAGTAAGAAAACAACAACTGTTGGGGTTATTATCCCAGACGTTAGTGATATCTACTTTGCTTCA
TTAGCACGCGGGATTGATGATGTTGCTACAATGTACAAGTACAACATCATTTTAGCGAACTCAGATGAAAACAACCAAAA
GGAAGTTCAAGTATTGAATACCTTATTGGCAAAACAAGTGGATGGTTTAATCTACATGGGTCACAGTATCTCAGATGCAA
TCCGTGCTGAATTCGCCCGTTCTAAGACACCAATCGTATTAGCTGGTTCAATCGATCCAGACGAACAAGTCGGTAGTGTT
AATATTGACTACGTTGCAGCCGTTAAGGACGCAACTTTGAAGTTAATCAAGAACGGTAACGAAAAAGTCGCCTTCATCTG
TGGCAACTTAGATTTTCCAATCAACAGCAAATATCGTTTACGTGGCTATAAAGATACCTTGAACGAAGCTGGTATTCCTT
ATGACGAAAGCTTAATTTTCGAAACAGAATACAGTTACAGTGCTGGTGAAGCCTTATTCGGTAAGGTTCAAGCAACTGGC
GCAACTGCTGCTGTTGTCAGTGACGATGAATTAGCCGTAGGTGTTTTAAATGCTGCTGTTGATGCAGGTGTTAATATTCC
AACTGACTTTGAAATTGTGACAAGTAATAACACGAAGTTAACTGAAATGGTTCGTCCTAAGATGACATCAATCTCACAAC
CTTTATATGATATGGGTGCTGTTGGGATGCGTCTGTTAACGAAGATGATGAACAAAGAAGAAATCGATGATAAGACAATC
CTATTGCCATATAGCATTGTTGATCGTCAATCAACTAAATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (7-52)

• Periplasmic binding protein-like domain (Peripla_BP_3) (175-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	62.614	98.799	0.619
ccpA	Streptococcus gordonii str. Challis substr. CH1	60.182	98.799	0.595
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	56.156	100	0.562