Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   AB7T04_RS02005 Genome accession   NZ_CP165780
Coordinates   392050..393003 (+) Length   317 a.a.
NCBI ID   WP_003156332.1    Uniprot ID   -
Organism   Bacillus velezensis strain L-15     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 387050..398003
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB7T04_RS01980 (AB7T04_01980) - 387094..388527 (+) 1434 WP_187297950.1 HAMP domain-containing sensor histidine kinase -
  AB7T04_RS01985 (AB7T04_01985) rapC 388680..389828 (+) 1149 WP_003156336.1 Rap family tetratricopeptide repeat protein Regulator
  AB7T04_RS01990 (AB7T04_01990) phrC 389812..389931 (+) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  AB7T04_RS01995 (AB7T04_01995) - 390081..390191 (-) 111 WP_369719092.1 YjcZ family sporulation protein -
  AB7T04_RS02000 (AB7T04_02000) - 390271..391635 (-) 1365 WP_071392130.1 aspartate kinase -
  AB7T04_RS02005 (AB7T04_02005) ceuB 392050..393003 (+) 954 WP_003156332.1 ABC transporter permease Machinery gene
  AB7T04_RS02010 (AB7T04_02010) - 392993..393940 (+) 948 WP_264101332.1 iron chelate uptake ABC transporter family permease subunit -
  AB7T04_RS02015 (AB7T04_02015) - 393934..394692 (+) 759 WP_264101333.1 ABC transporter ATP-binding protein -
  AB7T04_RS02020 (AB7T04_02020) - 394714..395658 (+) 945 WP_003156329.1 siderophore ABC transporter substrate-binding protein -
  AB7T04_RS02025 (AB7T04_02025) - 395700..397124 (-) 1425 WP_264101336.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34959.26 Da        Isoelectric Point: 9.6741

>NTDB_id=1031703 AB7T04_RS02005 WP_003156332.1 392050..393003(+) (ceuB) [Bacillus velezensis strain L-15]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFIFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=1031703 AB7T04_RS02005 WP_003156332.1 392050..393003(+) (ceuB) [Bacillus velezensis strain L-15]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCGAGCCCGCTTGTGAAAATGTC
TATCGCTTTTATTTTCGCGTTGGCGGGAAATTTCCTTTTCATGAAAATCCTCGAGAGAATCAAGTTCAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAACATCGTCAGCTCAATCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCATCTTGGCTGCAGGGAGATTTCTCACTGGTCGTTAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTCTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTCTTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533

Multiple sequence alignment