Detailed information NTG1031701

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: AB7T04_RS01985
• Genome accession: NZ_CP165780
• Coordinates: 388680..389828 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain L-15
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 383680..394828

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AB7T04_RS01965 (AB7T04_01965)	-	384077..384760 (-)	684	WP_202735837.1	ABC transporter ATP-binding protein	-
AB7T04_RS01970 (AB7T04_01970)	-	384775..386211 (-)	1437	WP_071392132.1	ABC transporter permease	-
AB7T04_RS01975 (AB7T04_01975)	-	386424..387107 (+)	684	WP_014416901.1	response regulator transcription factor	-
AB7T04_RS01980 (AB7T04_01980)	-	387094..388527 (+)	1434	WP_187297950.1	HAMP domain-containing sensor histidine kinase	-
AB7T04_RS01985 (AB7T04_01985)	rapC	388680..389828 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
AB7T04_RS01990 (AB7T04_01990)	phrC	389812..389931 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
AB7T04_RS01995 (AB7T04_01995)	-	390081..390191 (-)	111	WP_369719092.1	YjcZ family sporulation protein	-
AB7T04_RS02000 (AB7T04_02000)	-	390271..391635 (-)	1365	WP_071392130.1	aspartate kinase	-
AB7T04_RS02005 (AB7T04_02005)	ceuB	392050..393003 (+)	954	WP_003156332.1	ABC transporter permease	Machinery gene
AB7T04_RS02010 (AB7T04_02010)	-	392993..393940 (+)	948	WP_264101332.1	iron chelate uptake ABC transporter family permease subunit	-
AB7T04_RS02015 (AB7T04_02015)	-	393934..394692 (+)	759	WP_264101333.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=1031701 AB7T04_RS01985 WP_003156336.1 388680..389828(+) (rapC) [Bacillus velezensis strain L-15]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=1031701 AB7T04_RS01985 WP_003156336.1 388680..389828(+) (rapC) [Bacillus velezensis strain L-15]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAGGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATATCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAAGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568