Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   AB2115_RS04975 Genome accession   NZ_CP165618
Coordinates   1011027..1012295 (+) Length   422 a.a.
NCBI ID   WP_002337236.1    Uniprot ID   -
Organism   Enterococcus faecium strain ww_sludge_ent_V1_zoecandies_230529     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1006027..1017295
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB2115_RS04950 (AB2115_04950) pyrH 1006713..1007435 (+) 723 WP_002293877.1 UMP kinase -
  AB2115_RS04955 (AB2115_04955) frr 1007438..1007995 (+) 558 WP_002293875.1 ribosome recycling factor -
  AB2115_RS04960 (AB2115_04960) - 1008082..1009035 (-) 954 WP_000222572.1 IS30 family transposase -
  AB2115_RS04965 (AB2115_04965) - 1009257..1010069 (+) 813 WP_002294134.1 isoprenyl transferase -
  AB2115_RS04970 (AB2115_04970) - 1010066..1010866 (+) 801 WP_002294135.1 phosphatidate cytidylyltransferase -
  AB2115_RS04975 (AB2115_04975) eeP 1011027..1012295 (+) 1269 WP_002337236.1 RIP metalloprotease RseP Regulator
  AB2115_RS04980 (AB2115_04980) - 1012363..1014072 (+) 1710 WP_002297401.1 proline--tRNA ligase -

Sequence


Protein


Download         Length: 422 a.a.        Molecular weight: 46103.58 Da        Isoelectric Point: 4.9270

>NTDB_id=1030931 AB2115_RS04975 WP_002337236.1 1011027..1012295(+) (eeP) [Enterococcus faecium strain ww_sludge_ent_V1_zoecandies_230529]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAIVLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVIKKNPGKTLDFKIEREGQVQSVDVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1030931 AB2115_RS04975 WP_002337236.1 1011027..1012295(+) (eeP) [Enterococcus faecium strain ww_sludge_ent_V1_zoecandies_230529]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CGTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTAAGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CGACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains


Predicted by InterproScan.

(6-408)

(199-270)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.206

100

0.55

  eeP Streptococcus thermophilus LMG 18311

53.972

100

0.547


Multiple sequence alignment