Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   AB3Q54_RS07810 Genome accession   NZ_CP163515
Coordinates   1540811..1542088 (-) Length   425 a.a.
NCBI ID   WP_369351531.1    Uniprot ID   -
Organism   Ligilactobacillus agilis strain W70     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1535811..1547088
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB3Q54_RS07805 (AB3Q54_07805) - 1539075..1540787 (-) 1713 WP_369351530.1 proline--tRNA ligase -
  AB3Q54_RS07810 (AB3Q54_07810) eeP 1540811..1542088 (-) 1278 WP_369351531.1 RIP metalloprotease RseP Regulator
  AB3Q54_RS07815 (AB3Q54_07815) - 1542102..1542893 (-) 792 WP_369351532.1 phosphatidate cytidylyltransferase -
  AB3Q54_RS07820 (AB3Q54_07820) - 1542890..1543672 (-) 783 WP_050611162.1 isoprenyl transferase -
  AB3Q54_RS07825 (AB3Q54_07825) frr 1543775..1544329 (-) 555 WP_056977042.1 ribosome recycling factor -
  AB3Q54_RS07830 (AB3Q54_07830) pyrH 1544334..1545056 (-) 723 WP_056977041.1 UMP kinase -
  AB3Q54_RS07835 (AB3Q54_07835) - 1545330..1547060 (+) 1731 WP_172576940.1 DUF2207 domain-containing protein -

Sequence

Protein


Download         Length: 425 a.a.        Molecular weight: 46279.16 Da        Isoelectric Point: 9.5759

>NTDB_id=1030405 AB3Q54_RS07810 WP_369351531.1 1540811..1542088(-) (eeP) [Ligilactobacillus agilis strain W70]
MIVTILAFVLVFGTIVFVHEFGHYTLAKRSGILVREFAIGMGPKLFSYRKSGTTYTLRILPLGGYVRMAGLEEDSEELKK
GMAVSLILGENGKVSKINTSQKVSLMGGIGLELADWDLVDELYISGYENGNEDELKRYEVDHDALLVEHDGTEVQIAPRD
VQFQSAPLVSRMLTNFAGPFNNFILAIVAFALVAVLQGGVKTMTNTIASVQPNSVAHQAGIKAGDQLVEVAGVKTNDWTK
LAQTISERPGKKTTVVVKRQSTRLKFELTPKATQVNGQKVGLIGITSKLTVNRSPLAIIGYGFKESWQVTIQVLAALKNM
VTKGFNLNQLGGPVAMYSFTSQAAHYGLASVIMLLGLLSINLGIFNLLPIPALDGGKILLNIIEAIRGKPLDPNKEMIVT
VAGFAFLLILMVLVTWNDIARYFLH

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=1030405 AB3Q54_RS07810 WP_369351531.1 1540811..1542088(-) (eeP) [Ligilactobacillus agilis strain W70]
ATGATTGTAACCATTCTAGCCTTTGTGCTTGTTTTTGGAACCATTGTCTTTGTCCATGAGTTTGGGCACTATACCTTGGC
TAAACGGTCAGGGATTTTGGTGCGTGAATTTGCGATTGGAATGGGGCCTAAGCTTTTTTCTTACCGTAAGTCGGGAACAA
CTTATACACTGCGCATCCTACCTTTAGGGGGCTATGTCCGGATGGCTGGTCTAGAAGAAGACAGCGAGGAGTTAAAAAAG
GGCATGGCGGTAAGCCTAATCTTAGGTGAAAATGGTAAGGTAAGTAAGATTAATACCAGTCAAAAGGTAAGCTTAATGGG
GGGCATTGGCCTAGAGTTAGCCGACTGGGACTTGGTCGATGAGCTTTACATTAGTGGTTATGAAAATGGCAACGAAGATG
AGCTTAAACGCTACGAAGTTGACCACGATGCCCTCTTAGTGGAACACGATGGCACCGAGGTTCAAATTGCCCCGCGGGAC
GTGCAGTTCCAATCCGCTCCGCTGGTAAGTCGGATGCTGACTAATTTTGCGGGACCGTTTAATAACTTTATCTTAGCGAT
TGTAGCCTTTGCCTTGGTGGCAGTCCTCCAGGGTGGGGTTAAAACTATGACCAACACGATTGCCAGCGTGCAGCCTAATT
CGGTGGCCCACCAAGCGGGAATTAAGGCTGGTGATCAGCTCGTGGAAGTAGCCGGAGTCAAGACTAACGACTGGACTAAG
CTAGCCCAAACGATTAGTGAGCGGCCCGGTAAAAAAACAACGGTGGTTGTAAAGCGCCAGTCCACGCGGCTTAAGTTTGA
ATTAACGCCTAAGGCTACCCAGGTCAACGGCCAAAAGGTGGGCTTGATTGGCATTACCAGTAAGCTGACCGTTAACCGCA
GTCCGCTAGCGATTATTGGTTACGGCTTTAAGGAAAGCTGGCAGGTAACGATCCAAGTCTTAGCCGCCTTAAAAAATATG
GTTACTAAGGGCTTTAACCTTAATCAGTTAGGCGGACCAGTAGCCATGTACAGCTTTACTTCGCAGGCGGCCCATTACGG
CTTAGCAAGCGTGATTATGCTGCTAGGGTTGTTGTCGATTAACCTGGGAATTTTCAACCTCTTGCCGATTCCGGCCTTAG
ACGGGGGTAAGATTTTATTAAATATAATTGAAGCAATTAGGGGCAAGCCGCTAGACCCTAACAAGGAAATGATTGTAACT
GTGGCGGGCTTTGCCTTCTTGTTAATTTTAATGGTGCTGGTAACGTGGAATGATATTGCGCGTTATTTCTTGCATTAA

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(7-410)

PDZ domain (PDZ_6)

(207-259)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.122

100

0.482
  eeP Streptococcus thermophilus LMD-9

48.122

100

0.482

Multiple sequence alignment